Difference between revisions of "RXN-9667"

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(Created page with "Category:reaction == Reaction 4.2.1.58-RXN == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * direction: ** left-to-right * commo...")
(Created page with "Category:reaction == Reaction RXN-9667 == * direction: ** left-to-right * common-name: ** linolenoyl-lipid 15-desaturase * ec-number: ** [http://enzyme.expasy.org/EC/1.14....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 4.2.1.58-RXN ==
+
== Reaction RXN-9667 ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
+
** linolenoyl-lipid 15-desaturase
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** fatty acid synthase
 
−
** (3r)-3-hydroxybutanoyl-[acyl-carrier protein] dehydratase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/1.14.19.35 ec-1.14.19.35]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
−
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
−
* synonymous:
 
−
** crotonoyl-[acyl-carrier-protein] hydratase
 
−
** crotonyl acyl carrier protein hydratase
 
−
** &beta;-hydroxybutyryl acyl carrier protein dehydrase
 
−
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
 
−
** enoyl acyl carrier protein hydrase
 
−
** 3-hydroxybutyryl acyl carrier protein dehydratase
 
−
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
 
−
** &beta;-hydroxybutyryl acyl carrier protein (acp) dehydrase
 
−
** &beta;-hydroxybutyryl acyl carrier  protein dehydrase
 
−
</div>
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Beta-3-hydroxybutyryl-ACPs]][c] '''=>''' 1 [[Crotonyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[Linoleoyl-groups]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[Alpha-linolenoyl-groups]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ09228]]
−
* Gene: [[SJ11672]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ19629]]
+
* Gene: [[SJ03069]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ00320]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04443]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10624]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ15983]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17743]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10275]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ03883]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ00613]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ13014]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06617]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18059]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06616]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06944]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04769]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5971]], palmitate biosynthesis (type II fatty acid synthase):
+
* [[PWY-5997]], &alpha;-linolenate biosynthesis I (plants and red algae):
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
 
−
** '''7''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115599
+
* METANETX-RXN : MNXR122931
−
* LIGAND-RXN:
+
* RHEA:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04428 R04428]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=46409 46409]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=(3r)-3-hydroxybutanoyl-[acyl-carrier protein] dehydratase|(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase|fatty acid synthase}}
+
{{#set: common-name=linolenoyl-lipid 15-desaturase}}
−
{{#set: ec-number=ec-2.3.1.85|ec-4.2.1.59|ec-2.3.1.86}}
+
{{#set: ec-number=ec-1.14.19.35}}
−
{{#set: synonymous=crotonoyl-[acyl-carrier-protein] hydratase|crotonyl acyl carrier protein hydratase|&beta;-hydroxybutyryl acyl carrier protein dehydrase|enoyl acyl carrier protein hydrase|3-hydroxybutyryl acyl carrier protein dehydratase|&beta;-hydroxybutyryl acyl carrier  protein dehydrase|&beta;-hydroxybutyryl acyl carrier protein (acp) dehydrase|(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)|(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=16}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=3}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-9667

  • direction:
    • left-to-right
  • common-name:
    • linolenoyl-lipid 15-desaturase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5997, α-linolenate biosynthesis I (plants and red algae):
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122931
  • RHEA:





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