Difference between revisions of "RXN-9667"

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(Created page with "Category:reaction == Reaction O-SUCCINYLBENZOATE-COA-LIG-RXN == * direction: ** left-to-right * common-name: ** o-succinylbenzoate-coa ligase * ec-number: ** [http://enzym...")
(Created page with "Category:reaction == Reaction RXN-7699 == * direction: ** reversible * common-name: ** d-specific enoyl-coa hydratase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.11...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction O-SUCCINYLBENZOATE-COA-LIG-RXN ==
+
== Reaction RXN-7699 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** o-succinylbenzoate-coa ligase
+
** d-specific enoyl-coa hydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.26 ec-6.2.1.26]
+
** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[O-SUCCINYLBENZOATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-6972]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[D-3-HYDROXYACYL-COA]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03066]]
+
* Gene: [[SJ03584]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04769]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5837]], 2-carboxy-1,4-naphthoquinol biosynthesis:
+
* [[PWY-6657]], polyhydroxydecanoate biosynthesis:
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7288]], fatty acid &beta;-oxidation VII (yeast peroxisome):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5138]], fatty acid &beta;-oxidation IV (unsaturated, even number):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-391]], fatty acid &beta;-oxidation VI (mammalian peroxisome):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17010 17010]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26529 26529]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04030 R04030]
+
** [http://www.genome.jp/dbget-bin/www_bget?R09698 R09698]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P37353 P37353]
+
{{#set: common-name=d-specific enoyl-coa hydratase}}
−
** [http://www.uniprot.org/uniprot/P23971 P23971]
+
{{#set: ec-number=ec-4.2.1.119}}
−
** [http://www.uniprot.org/uniprot/Q9CHK3 Q9CHK3]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/Q55182 Q55182]
+
{{#set: nb pathway associated=4}}
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=o-succinylbenzoate-coa ligase}}
 
−
{{#set: ec-number=ec-6.2.1.26}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:16, 14 January 2021

Reaction RXN-7699

  • direction:
    • reversible
  • common-name:
    • d-specific enoyl-coa hydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6657, polyhydroxydecanoate biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation VII (yeast peroxisome):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5138, fatty acid β-oxidation IV (unsaturated, even number):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (mammalian peroxisome):
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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