Difference between revisions of "RXN-9680"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13441 RXN-13441] == * direction: ** left-to-right * common-name: ** 3-oxo-icosatrienoyl-coa syn...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16820 RXN-16820] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13441 RXN-13441] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16820 RXN-16820] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** 3-oxo-icosatrienoyl-coa synthase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.1.199 ec-2.3.1.199]
+
** [http://enzyme.expasy.org/EC/2.8.1.13 ec-2.8.1.13]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[LINOLENOYL-COA]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14422]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Donor-H2]][c] '''+''' 1 [[ENZYME-S-SULFANYLCYSTEINE]][c] '''+''' 1 [[tRNA-uridine34]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROT-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNA-2-thiouridine34]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ11672]]
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* Gene: [[SJ00619]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ19629]]
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* Gene: [[SJ13939]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ06616]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00613]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-oxo-icosatrienoyl-coa synthase}}
+
{{#set: ec-number=ec-2.8.1.13}}
{{#set: ec-number=ec-2.3.1.199}}
+
{{#set: nb gene associated=2}}
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=3}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction RXN-16820

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links