Difference between revisions of "RXN-9839"

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(Created page with "Category:reaction == Reaction RXN66-476 == * direction: ** left-to-right * common-name: ** fatty aldehyde dehydrogenase ** aldehyde dehydrogenase (nad) ** straight chain f...")
(Created page with "Category:reaction == Reaction H2NEOPTERINALDOL-RXN == * direction: ** left-to-right * common-name: ** dihydroneopterin aldolase * ec-number: ** [http://enzyme.expasy.org/E...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN66-476 ==
+
== Reaction H2NEOPTERINALDOL-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** fatty aldehyde dehydrogenase
+
** dihydroneopterin aldolase
−
** aldehyde dehydrogenase (nad)
 
−
** straight chain fatty aldehyde dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
+
** [http://enzyme.expasy.org/EC/4.1.2.25 ec-4.1.2.25]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[Odd-Straight-Chain-234-Sat-FALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[Odd-Straight-Chain-234-Sat-FA]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[DIHYDRO-NEO-PTERIN]][c] '''=>''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[GLYCOLALDEHYDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ22398]]
−
* Gene: [[SJ22552]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ11330]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06456]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ17249]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ05897]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06359]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10107]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ11331]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ09287]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ00435]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06047]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06470]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-388]], ceramide degradation by &alpha;-oxidation:
+
* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus):
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6148]], tetrahydromethanopterin biosynthesis:
 +
** '''2''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10541 10541]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03504 R03504]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P22291 P22291]
 +
** [http://www.uniprot.org/uniprot/Q9CGE4 Q9CGE4]
 +
** [http://www.uniprot.org/uniprot/Q9JUL3 Q9JUL3]
 +
** [http://www.uniprot.org/uniprot/P28823 P28823]
 +
** [http://www.uniprot.org/uniprot/P29251 P29251]
 +
** [http://www.uniprot.org/uniprot/P53848 P53848]
 +
** [http://www.uniprot.org/uniprot/O75013 O75013]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=straight chain fatty aldehyde dehydrogenase|fatty aldehyde dehydrogenase|aldehyde dehydrogenase (nad)}}
+
{{#set: common-name=dihydroneopterin aldolase}}
−
{{#set: ec-number=ec-1.2.1.3}}
+
{{#set: ec-number=ec-4.1.2.25}}
−
{{#set: nb gene associated=12}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:18, 14 January 2021

Reaction H2NEOPTERINALDOL-RXN

  • direction:
    • left-to-right
  • common-name:
    • dihydroneopterin aldolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6797, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6148, tetrahydromethanopterin biosynthesis:
    • 2 reactions found over 14 reactions in the full pathway
  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7539, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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