Difference between revisions of "RXN-9896"

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(Created page with "Category:reaction == Reaction GLYOXI-RXN == * direction: ** reversible * common-name: ** glyoxalase i ** lactoylglutathione lyase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction PHOSPHASERSYN-RXN == * direction: ** reversible * common-name: ** cdp-diacylglycerol-serine o-phosphatidyltransferase * ec-number: ** [http:/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLYOXI-RXN ==
+
== Reaction PHOSPHASERSYN-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** glyoxalase i
+
** cdp-diacylglycerol-serine o-phosphatidyltransferase
−
** lactoylglutathione lyase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.4.1.5 ec-4.4.1.5]
+
** [http://enzyme.expasy.org/EC/2.7.8.8 ec-2.7.8.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-LACTOYL-GLUTATHIONE]][c] '''<=>''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[METHYL-GLYOXAL]][c]
+
* 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[SER]][c] '''<=>''' 1 [[CMP]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-SERINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ19545]]
−
* Gene: [[SJ17178]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ19492]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20171]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11959]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02270]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ13886]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5386]], methylglyoxal degradation I:
+
* [[PHOSLIPSYN2-PWY]], superpathway of phospholipid biosynthesis II (plants):
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''13''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5669]], phosphatidylserine and phosphatidylethanolamine biosynthesis I:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19072 19072]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16916 16916]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02530 R02530]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01800 R01800]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q04760 Q04760]
+
** [http://www.uniprot.org/uniprot/P39823 P39823]
−
** [http://www.uniprot.org/uniprot/P0AC81 P0AC81]
+
** [http://www.uniprot.org/uniprot/O27106 O27106]
−
** [http://www.uniprot.org/uniprot/P0A0T3 P0A0T3]
+
** [http://www.uniprot.org/uniprot/P96282 P96282]
−
** [http://www.uniprot.org/uniprot/P0A0T2 P0A0T2]
+
** [http://www.uniprot.org/uniprot/Q9ZM68 Q9ZM68]
−
** [http://www.uniprot.org/uniprot/P44638 P44638]
+
** [http://www.uniprot.org/uniprot/Q58609 Q58609]
−
** [http://www.uniprot.org/uniprot/P0A1Q2 P0A1Q2]
+
** [http://www.uniprot.org/uniprot/O28235 O28235]
−
** [http://www.uniprot.org/uniprot/P46417 P46417]
+
** [http://www.uniprot.org/uniprot/O84833 O84833]
−
** [http://www.uniprot.org/uniprot/Q42891 Q42891]
+
** [http://www.uniprot.org/uniprot/Q9Z6S6 Q9Z6S6]
−
** [http://www.uniprot.org/uniprot/Q55595 Q55595]
+
** [http://www.uniprot.org/uniprot/Q9JR61 Q9JR61]
−
** [http://www.uniprot.org/uniprot/Q09751 Q09751]
+
** [http://www.uniprot.org/uniprot/Q9PNI0 Q9PNI0]
−
** [http://www.uniprot.org/uniprot/Q9XGF2 Q9XGF2]
+
** [http://www.uniprot.org/uniprot/Q9ZDT3 Q9ZDT3]
−
** [http://www.uniprot.org/uniprot/P16635 P16635]
+
** [http://www.uniprot.org/uniprot/Q48269 Q48269]
 +
** [http://www.uniprot.org/uniprot/Q8X9F5 Q8X9F5]
 +
** [http://www.uniprot.org/uniprot/P08456 P08456]
 +
** [http://www.uniprot.org/uniprot/P25578 P25578]
 +
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=lactoylglutathione lyase|glyoxalase i}}
+
{{#set: common-name=cdp-diacylglycerol-serine o-phosphatidyltransferase}}
−
{{#set: ec-number=ec-4.4.1.5}}
+
{{#set: ec-number=ec-2.7.8.8}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:01, 14 January 2021

Reaction PHOSPHASERSYN-RXN

  • direction:
    • reversible
  • common-name:
    • cdp-diacylglycerol-serine o-phosphatidyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PHOSLIPSYN2-PWY, superpathway of phospholipid biosynthesis II (plants):
    • 13 reactions found over 3 reactions in the full pathway
  • PWY-5669, phosphatidylserine and phosphatidylethanolamine biosynthesis I:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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