Difference between revisions of "RXN-9896"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction PHOSPHASERSYN-RXN == * direction: ** reversible * common-name: ** cdp-diacylglycerol-serine o-phosphatidyltransferase * ec-number: ** [http:/...")
(Created page with "Category:reaction == Reaction RXN-9896 == * direction: ** left-to-right == Reaction formula == * 1 3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE[c] '''=>''' 1 4-TRIMETHYLAMMON...")
 
(2 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PHOSPHASERSYN-RXN ==
+
== Reaction RXN-9896 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** cdp-diacylglycerol-serine o-phosphatidyltransferase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.7.8.8 ec-2.7.8.8]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[SER]][c] '''<=>''' 1 [[CMP]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-SERINE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''=>''' 1 [[4-TRIMETHYLAMMONIOBUTANAL]][c] '''+''' 1 [[GLY]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19545]]
+
* Gene: [[SJ06446]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PHOSLIPSYN2-PWY]], superpathway of phospholipid biosynthesis II (plants):
+
* [[PWY-6100]], L-carnitine biosynthesis:
−
** '''13''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5669]], phosphatidylserine and phosphatidylethanolamine biosynthesis I:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR108075
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16916 16916]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01800 R01800]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03284 R03284]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P39823 P39823]
 
−
** [http://www.uniprot.org/uniprot/O27106 O27106]
 
−
** [http://www.uniprot.org/uniprot/P96282 P96282]
 
−
** [http://www.uniprot.org/uniprot/Q9ZM68 Q9ZM68]
 
−
** [http://www.uniprot.org/uniprot/Q58609 Q58609]
 
−
** [http://www.uniprot.org/uniprot/O28235 O28235]
 
−
** [http://www.uniprot.org/uniprot/O84833 O84833]
 
−
** [http://www.uniprot.org/uniprot/Q9Z6S6 Q9Z6S6]
 
−
** [http://www.uniprot.org/uniprot/Q9JR61 Q9JR61]
 
−
** [http://www.uniprot.org/uniprot/Q9PNI0 Q9PNI0]
 
−
** [http://www.uniprot.org/uniprot/Q9ZDT3 Q9ZDT3]
 
−
** [http://www.uniprot.org/uniprot/Q48269 Q48269]
 
−
** [http://www.uniprot.org/uniprot/Q8X9F5 Q8X9F5]
 
−
** [http://www.uniprot.org/uniprot/P08456 P08456]
 
−
** [http://www.uniprot.org/uniprot/P25578 P25578]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=cdp-diacylglycerol-serine o-phosphatidyltransferase}}
 
−
{{#set: ec-number=ec-2.7.8.8}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-9896

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6100, L-carnitine biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108075
  • LIGAND-RXN:




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-9896&oldid=140830"