Difference between revisions of "RXN-9896"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] == * direction: ** reversible * common-name: ** chorismate mut...")
 
(Created page with "Category:reaction == Reaction RXN-9896 == * direction: ** left-to-right == Reaction formula == * 1 3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE[c] '''=>''' 1 4-TRIMETHYLAMMON...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] ==
+
== Reaction RXN-9896 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** chorismate mutase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/5.4.99.5 ec-5.4.99.5]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CHORISMATE]][c] '''<=>''' 1 [[PREPHENATE]][c]
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* 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''=>''' 1 [[4-TRIMETHYLAMMONIOBUTANAL]][c] '''+''' 1 [[GLY]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07700]]
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* Gene: [[SJ06446]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00045]]
 
−
** Category: [[orthology]]
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3462]], L-phenylalanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3462 PWY-3462]
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* [[PWY-6100]], L-carnitine biosynthesis:
−
** '''2''' reactions found over '''3''' reactions in the full pathway
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6627]], salinosporamide A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6627 PWY-6627]
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-3461]], L-tyrosine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3461 PWY-3461]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6120]], L-tyrosine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6120 PWY-6120]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7626]], bacilysin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7626 PWY-7626]
 
−
** '''1''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR108075
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13900 13900]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01715 R01715]
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** [http://www.genome.jp/dbget-bin/www_bget?R03284 R03284]
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* UNIPROT:
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{{#set: direction=left-to-right}}
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** [http://www.uniprot.org/uniprot/P19080 P19080]
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{{#set: nb gene associated=1}}
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** [http://www.uniprot.org/uniprot/P27603 P27603]
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{{#set: nb pathway associated=1}}
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** [http://www.uniprot.org/uniprot/P32178 P32178]
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{{#set: reconstruction category=orthology}}
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** [http://www.uniprot.org/uniprot/P43900 P43900]
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{{#set: reconstruction tool=pantograph}}
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** [http://www.uniprot.org/uniprot/Q9RQV7 Q9RQV7]
 
−
** [http://www.uniprot.org/uniprot/P21204 P21204]
 
−
** [http://www.uniprot.org/uniprot/Q58029 Q58029]
 
−
** [http://www.uniprot.org/uniprot/Q57696 Q57696]
 
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** [http://www.uniprot.org/uniprot/P43902 P43902]
 
−
** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
 
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** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
 
−
** [http://www.uniprot.org/uniprot/P07023 P07023]
 
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** [http://www.uniprot.org/uniprot/Q02286 Q02286]
 
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** [http://www.uniprot.org/uniprot/Q02287 Q02287]
 
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** [http://www.uniprot.org/uniprot/P42738 P42738]
 
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** [http://www.uniprot.org/uniprot/O22409 O22409]
 
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** [http://www.uniprot.org/uniprot/O22410 O22410]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=chorismate mutase}}
 
−
{{#set: ec-number=ec-5.4.99.5}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=7}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-9896

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6100, L-carnitine biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108075
  • LIGAND-RXN:




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