Difference between revisions of "RXN-9896"

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(Created page with "Category:reaction == Reaction GLYOXI-RXN == * direction: ** reversible * common-name: ** glyoxalase i ** lactoylglutathione lyase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction RXN-9896 == * direction: ** left-to-right == Reaction formula == * 1 3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE[c] '''=>''' 1 4-TRIMETHYLAMMON...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLYOXI-RXN ==
+
== Reaction RXN-9896 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** glyoxalase i
 
−
** lactoylglutathione lyase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/4.4.1.5 ec-4.4.1.5]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-LACTOYL-GLUTATHIONE]][c] '''<=>''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[METHYL-GLYOXAL]][c]
+
* 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''=>''' 1 [[4-TRIMETHYLAMMONIOBUTANAL]][c] '''+''' 1 [[GLY]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ06446]]
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* Gene: [[SJ17178]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ19492]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20171]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11959]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02270]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ13886]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5386]], methylglyoxal degradation I:
+
* [[PWY-6100]], L-carnitine biosynthesis:
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR100355
+
* METANETX-RXN : MNXR108075
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19072 19072]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02530 R02530]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03284 R03284]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q04760 Q04760]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P0AC81 P0AC81]
 
−
** [http://www.uniprot.org/uniprot/P0A0T3 P0A0T3]
 
−
** [http://www.uniprot.org/uniprot/P0A0T2 P0A0T2]
 
−
** [http://www.uniprot.org/uniprot/P44638 P44638]
 
−
** [http://www.uniprot.org/uniprot/P0A1Q2 P0A1Q2]
 
−
** [http://www.uniprot.org/uniprot/P46417 P46417]
 
−
** [http://www.uniprot.org/uniprot/Q42891 Q42891]
 
−
** [http://www.uniprot.org/uniprot/Q55595 Q55595]
 
−
** [http://www.uniprot.org/uniprot/Q09751 Q09751]
 
−
** [http://www.uniprot.org/uniprot/Q9XGF2 Q9XGF2]
 
−
** [http://www.uniprot.org/uniprot/P16635 P16635]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=glyoxalase i|lactoylglutathione lyase}}
 
−
{{#set: ec-number=ec-4.4.1.5}}
 
−
{{#set: nb gene associated=6}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-9896

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6100, L-carnitine biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108075
  • LIGAND-RXN:




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