Difference between revisions of "RXN-9914"

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(Created page with "Category:reaction == Reaction Exchange_BIOMASS == * direction: ** left-to-right == Reaction formula == * 1 BIOMASS[e] '''=>''' 1 BIOMASS[C-BOUNDARY] == Gene(s) ass...")
(Created page with "Category:reaction == Reaction RXN-8654 == * direction: ** left-to-right * common-name: ** lipoate-protein ligase ** lipoate-atp adenylate transferase == Reaction formula =...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction Exchange_BIOMASS ==
+
== Reaction RXN-8654 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** lipoate-protein ligase
 +
** lipoate-atp adenylate transferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[BIOMASS]][e] '''=>''' 1 [[BIOMASS]][C-BOUNDARY]
+
* 1 [[ATP]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[LIPOYL-AMP]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ04393]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11692]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06657]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03663]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-522]], lipoate salvage I:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6984]], lipoate salvage II:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[biomass_reaction]]; tool: [[curation]]; comment: exchange biomass to boundary
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12914 12914]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: common-name=lipoate-protein ligase|lipoate-atp adenylate transferase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=4}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=exchange biomass to boundary}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=biomass_reaction}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:02, 14 January 2021

Reaction RXN-8654

  • direction:
    • left-to-right
  • common-name:
    • lipoate-protein ligase
    • lipoate-atp adenylate transferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-522, lipoate salvage I:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6984, lipoate salvage II:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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