Difference between revisions of "RXN-9952"

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(Created page with "Category:reaction == Reaction XPPRT == * direction: ** reversible * common-name: ** xmp:pyrophosphate phosphoribosyltransferase == Reaction formula == * 1.0 PRPP[c] ''...")
(Created page with "Category:reaction == Reaction ISOLEUCINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** isoleucine-trna ligase * ec-number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction XPPRT ==
+
== Reaction ISOLEUCINE--TRNA-LIGASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** xmp:pyrophosphate phosphoribosyltransferase
+
** isoleucine-trna ligase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/6.1.1.5 ec-6.1.1.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[PRPP]][c] '''+''' 1.0 [[XANTHINE]][c] '''<=>''' 1.0 [[PPI]][c] '''+''' 1.0 [[XANTHOSINE-5-PHOSPHATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[ILE]][c] '''+''' 1 [[ILE-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ILE-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12523]]
+
* Gene: [[SJ03174]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16361]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03173]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging:
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=xmp:pyrophosphate phosphoribosyltransferase}}
+
* RHEA:
−
{{#set: nb gene associated=1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11061 11061]
−
{{#set: nb pathway associated=0}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=orthology}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03656 R03656]
−
{{#set: reconstruction tool=pantograph}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P18330 P18330]
 +
** [http://www.uniprot.org/uniprot/P36422 P36422]
 +
** [http://www.uniprot.org/uniprot/O29622 O29622]
 +
** [http://www.uniprot.org/uniprot/P47587 P47587]
 +
** [http://www.uniprot.org/uniprot/Q9ZCU4 Q9ZCU4]
 +
** [http://www.uniprot.org/uniprot/P46213 P46213]
 +
** [http://www.uniprot.org/uniprot/P41257 P41257]
 +
** [http://www.uniprot.org/uniprot/Q9JVY4 Q9JVY4]
 +
** [http://www.uniprot.org/uniprot/Q58357 Q58357]
 +
** [http://www.uniprot.org/uniprot/O83466 O83466]
 +
** [http://www.uniprot.org/uniprot/Q9Z972 Q9Z972]
 +
** [http://www.uniprot.org/uniprot/P56456 P56456]
 +
** [http://www.uniprot.org/uniprot/O58792 O58792]
 +
** [http://www.uniprot.org/uniprot/O84022 O84022]
 +
** [http://www.uniprot.org/uniprot/Q9ZJJ1 Q9ZJJ1]
 +
** [http://www.uniprot.org/uniprot/O66651 O66651]
 +
** [http://www.uniprot.org/uniprot/Q9CEH8 Q9CEH8]
 +
** [http://www.uniprot.org/uniprot/O27428 O27428]
 +
** [http://www.uniprot.org/uniprot/Q45477 Q45477]
 +
** [http://www.uniprot.org/uniprot/O51773 O51773]
 +
** [http://www.uniprot.org/uniprot/P46207 P46207]
 +
** [http://www.uniprot.org/uniprot/P41252 P41252]
 +
** [http://www.uniprot.org/uniprot/P41972 P41972]
 +
** [http://www.uniprot.org/uniprot/P48526 P48526]
 +
** [http://www.uniprot.org/uniprot/P75258 P75258]
 +
** [http://www.uniprot.org/uniprot/P73505 P73505]
 +
** [http://www.uniprot.org/uniprot/Q49024 Q49024]
 +
** [http://www.uniprot.org/uniprot/Q49074 Q49074]
 +
** [http://www.uniprot.org/uniprot/P43824 P43824]
 +
** [http://www.uniprot.org/uniprot/P09436 P09436]
 +
** [http://www.uniprot.org/uniprot/P00956 P00956]
 +
** [http://www.uniprot.org/uniprot/Q94425 Q94425]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=isoleucine-trna ligase}}
 +
{{#set: ec-number=ec-6.1.1.5}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:00, 14 January 2021

Reaction ISOLEUCINE--TRNA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • isoleucine-trna ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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