Difference between revisions of "RXN0-1061"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12461 RXN-12461] == * direction: ** left-to-right * common-name: ** trna (carboxymethyluridine3...")
(Created page with "Category:reaction == Reaction RXN0-1061 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/3.6.4.9 ec-3.6.4.9] ** [http://enzyme.expasy.org/EC/3.6....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12461 RXN-12461] ==
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== Reaction RXN0-1061 ==
 
* direction:
 
* direction:
** left-to-right
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** reversible
* common-name:
 
** trna (carboxymethyluridine34-5-o)-methyltransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.229 ec-2.1.1.229]
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** [http://enzyme.expasy.org/EC/3.6.4.9 ec-3.6.4.9]
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** [http://enzyme.expasy.org/EC/3.6.4.10 ec-3.6.4.10]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[carbo-me-ur-34-tRNA]][c] '''=>''' 1 [[5-2-me-oxy-2-oxo-et-ur-34-tRNA]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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* 1 [[ATP]][c] '''+''' 1 [[Unfolded-Proteins]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[General-Protein-Substrates]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ02625]]
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* Gene: [[SJ17310]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ16612]]
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* Gene: [[SJ16800]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7888]], tRNA-uridine 2-thiolation (cytoplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7888 PWY-7888]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829]
 
** '''11''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
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* METANETX-RXN : MNXR123101
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43209 43209]
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{{#set: direction=reversible}}
{{#set: direction=left-to-right}}
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{{#set: ec-number=ec-3.6.4.10|ec-3.6.4.9}}
{{#set: common-name=trna (carboxymethyluridine34-5-o)-methyltransferase}}
 
{{#set: ec-number=ec-2.1.1.229}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=2}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN0-1061

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123101