Difference between revisions of "RXN0-1061"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FACOAL18111Z FACOAL18111Z] == * direction: ** left-to-right * common-name: ** long-chain acyl-coa s...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12461 RXN-12461] == * direction: ** left-to-right * common-name: ** trna (carboxymethyluridine3...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FACOAL18111Z FACOAL18111Z] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12461 RXN-12461] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** long-chain acyl-coa synthetase (18:1(11z))
+
** trna (carboxymethyluridine34-5-o)-methyltransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.1.1.229 ec-2.1.1.229]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[ATP]][c] '''+''' 1.0 [[CO-A]][c] '''+''' 1.0 [[OLEATE-CPD]][c] '''=>''' 1.0 [[AMP]][c] '''+''' 1.0 [[CPD-18346]][c] '''+''' 1.0 [[PPI]][c]
+
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[carbo-me-ur-34-tRNA]][c] '''=>''' 1 [[5-2-me-oxy-2-oxo-et-ur-34-tRNA]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ03650]]
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* Gene: [[SJ02625]]
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** Category: [[orthology]]
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** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16612]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7888]], tRNA-uridine 2-thiolation (cytoplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7888 PWY-7888]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829]
 +
** '''11''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43209 43209]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=long-chain acyl-coa synthetase (18:1(11z))}}
+
{{#set: common-name=trna (carboxymethyluridine34-5-o)-methyltransferase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-2.1.1.229}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction RXN-12461

  • direction:
    • left-to-right
  • common-name:
    • trna (carboxymethyluridine34-5-o)-methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7888, tRNA-uridine 2-thiolation (cytoplasmic): PWY-7888
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6829, tRNA methylation (yeast): PWY-6829
    • 11 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





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