Difference between revisions of "RXN0-1061"

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(Created page with "Category:reaction == Reaction GLUTATHIONE-REDUCT-NADPH-RXN == * direction: ** left-to-right * common-name: ** glutathione reductase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction RXN-10780 == * direction: ** left-to-right * common-name: ** aldehyde dehydrogenase (nad) ** 5-hydroxyindole acetaldehyde dehydrogenase * ec-...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTATHIONE-REDUCT-NADPH-RXN ==
+
== Reaction RXN-10780 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutathione reductase
+
** aldehyde dehydrogenase (nad)
 +
** 5-hydroxyindole acetaldehyde dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.8.1.7 ec-1.8.1.7]
+
** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[OXIDIZED-GLUTATHIONE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[GLUTATHIONE]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-HYDROXYINDOLE_ACETATE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22541]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ06470]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 16: Line 18:
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ17355]]
+
* Gene: [[SJ06359]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06047]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ09287]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05897]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10107]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ22552]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17249]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00435]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11330]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06456]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 22: Line 53:
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ11331]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4081]], glutathione-peroxide redox reactions:
+
* [[PWY-6313]], serotonin degradation:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[GLUT-REDOX-PWY]], glutathione-glutaredoxin redox reactions:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11742 11742]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31216 31216]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00115 R00115]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04903 R04903]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P43783 P43783]
 
−
** [http://www.uniprot.org/uniprot/Q9CH92 Q9CH92]
 
−
** [http://www.uniprot.org/uniprot/P48639 P48639]
 
−
** [http://www.uniprot.org/uniprot/P11804 P11804]
 
−
** [http://www.uniprot.org/uniprot/P06715 P06715]
 
−
** [http://www.uniprot.org/uniprot/P23189 P23189]
 
−
** [http://www.uniprot.org/uniprot/P80461 P80461]
 
−
** [http://www.uniprot.org/uniprot/Q60151 Q60151]
 
−
** [http://www.uniprot.org/uniprot/P41921 P41921]
 
−
** [http://www.uniprot.org/uniprot/Q9TWE1 Q9TWE1]
 
−
** [http://www.uniprot.org/uniprot/O64409 O64409]
 
−
** [http://www.uniprot.org/uniprot/Q43621 Q43621]
 
−
** [http://www.uniprot.org/uniprot/P48640 P48640]
 
−
** [http://www.uniprot.org/uniprot/Q43154 Q43154]
 
−
** [http://www.uniprot.org/uniprot/Q93379 Q93379]
 
−
** [http://www.uniprot.org/uniprot/P78965 P78965]
 
−
** [http://www.uniprot.org/uniprot/P42770 P42770]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutathione reductase}}
+
{{#set: common-name=5-hydroxyindole acetaldehyde dehydrogenase|aldehyde dehydrogenase (nad)}}
−
{{#set: ec-number=ec-1.8.1.7}}
+
{{#set: ec-number=ec-1.2.1.3}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=12}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:02, 5 January 2021

Reaction RXN-10780

  • direction:
    • left-to-right
  • common-name:
    • aldehyde dehydrogenase (nad)
    • 5-hydroxyindole acetaldehyde dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6313, serotonin degradation:
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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