Difference between revisions of "RXN0-1321"

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(Created page with "Category:reaction == Reaction NITRATE-REDUCTASE-NADH-RXN == * direction: ** left-to-right * common-name: ** nitrate reductase ** nitrate reductase (nadh) * ec-number: ** [...")
(Created page with "Category:reaction == Reaction RXN0-1321 == * direction: ** left-to-right * common-name: ** trna-guanine transglycosylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NITRATE-REDUCTASE-NADH-RXN ==
+
== Reaction RXN0-1321 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nitrate reductase
+
** trna-guanine transglycosylase
−
** nitrate reductase (nadh)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.1.1 ec-1.7.1.1]
+
** [http://enzyme.expasy.org/EC/2.4.2.29 ec-2.4.2.29]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADH]][c] '''+''' 1 [[NITRATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[NITRITE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[7-AMINOMETHYL-7-DEAZAGUANINE]][c] '''+''' 1 [[Guanine34-in-tRNAs]][c] '''=>''' 1 [[GUANINE]][c] '''+''' 1 [[tRNA-with-7-aminomethyl-7-deazaguanine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15446]]
+
* Gene: [[SJ12245]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00644]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-381]], nitrate reduction II (assimilatory):
+
* [[PWY-6700]], queuosine biosynthesis I (de novo):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR123112
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17915 17915]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24105 24105]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10209 R10209]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q39607 Q39607]
 
−
** [http://www.uniprot.org/uniprot/Q41201 Q41201]
 
−
** [http://www.uniprot.org/uniprot/P17569 P17569]
 
−
** [http://www.uniprot.org/uniprot/P54233 P54233]
 
−
** [http://www.uniprot.org/uniprot/P36841 P36841]
 
−
** [http://www.uniprot.org/uniprot/P27967 P27967]
 
−
** [http://www.uniprot.org/uniprot/P27969 P27969]
 
−
** [http://www.uniprot.org/uniprot/P11035 P11035]
 
−
** [http://www.uniprot.org/uniprot/P08509 P08509]
 
−
** [http://www.uniprot.org/uniprot/P11605 P11605]
 
−
** [http://www.uniprot.org/uniprot/P23312 P23312]
 
−
** [http://www.uniprot.org/uniprot/P17570 P17570]
 
−
** [http://www.uniprot.org/uniprot/P16081 P16081]
 
−
** [http://www.uniprot.org/uniprot/Q01170 Q01170]
 
−
** [http://www.uniprot.org/uniprot/P39865 P39865]
 
−
** [http://www.uniprot.org/uniprot/P11832 P11832]
 
−
** [http://www.uniprot.org/uniprot/P39869 P39869]
 
−
** [http://www.uniprot.org/uniprot/Q43265 Q43265]
 
−
** [http://www.uniprot.org/uniprot/P43101 P43101]
 
−
** [http://www.uniprot.org/uniprot/P43100 P43100]
 
−
** [http://www.uniprot.org/uniprot/Q42497 Q42497]
 
−
** [http://www.uniprot.org/uniprot/P39866 P39866]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nitrate reductase|nitrate reductase (nadh)}}
+
{{#set: common-name=trna-guanine transglycosylase}}
−
{{#set: ec-number=ec-1.7.1.1}}
+
{{#set: ec-number=ec-2.4.2.29}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN0-1321

  • direction:
    • left-to-right
  • common-name:
    • trna-guanine transglycosylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6700, queuosine biosynthesis I (de novo):
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123112
  • RHEA:
  • LIGAND-RXN:





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