Difference between revisions of "RXN0-1483"

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(Created page with "Category:reaction == Reaction MALSYN-RXN == * direction: ** left-to-right * common-name: ** malate synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.3.9 ec-2.3.3.9...")
(Created page with "Category:reaction == Reaction 2.7.11.24-RXN == * direction: ** reversible * common-name: ** map kinase ** protein kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction MALSYN-RXN ==
+
== Reaction 2.7.11.24-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** malate synthase
+
** map kinase
 +
** protein kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.3.9 ec-2.3.3.9]
+
** [http://enzyme.expasy.org/EC/2.7.11.24 ec-2.7.11.24]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETYL-COA]][c] '''+''' 1 [[GLYOX]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[MAL]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Protein-L-Ser-or-L-Thr-L-Pro]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Protein-L-Ser-or-L-Thr-P-L-Pro]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14150]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ06000]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00969]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02374]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02804]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03592]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16326]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11284]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12927]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16082]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12262]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05934]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ12260]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14523]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15982]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02801]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02805]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12264]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22422]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16021]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[GLYOXYLATE-BYPASS]], glyoxylate cycle:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7294]], D-xylose degradation IV:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7295]], L-arabinose degradation IV:
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7854]], crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered):
 
−
** '''1''' reactions found over '''14''' reactions in the full pathway
 
−
* [[PWY-7118]], chitin degradation to ethanol:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[GLYOXDEG-PWY]], glycolate and glyoxylate degradation II:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=reversible}}
−
* RHEA:
+
{{#set: common-name=protein kinase|map kinase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18182 18182]
+
{{#set: ec-number=ec-2.7.11.24}}
−
* PIR:
+
{{#set: nb gene associated=19}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40715 I40715]
+
{{#set: nb pathway associated=0}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0195 JX0195]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0196 JX0196]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S15387 S15387]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S17773 S17773]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S17774 S17774]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26645 S26645]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S44186 S44186]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S48493 S48493]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S51788 S51788]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYCNMU SYCNMU]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYCSM2 SYCSM2]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYECMA SYECMA]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYHQMA SYHQMA]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYKVMA SYKVMA]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYRPMA SYRPMA]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T03412 T03412]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07690 T07690]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T44752 T44752]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00472 R00472]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P42450 P42450]
 
−
** [http://www.uniprot.org/uniprot/Q02216 Q02216]
 
−
** [http://www.uniprot.org/uniprot/P28344 P28344]
 
−
** [http://www.uniprot.org/uniprot/P28345 P28345]
 
−
** [http://www.uniprot.org/uniprot/P30952 P30952]
 
−
** [http://www.uniprot.org/uniprot/Q43827 Q43827]
 
−
** [http://www.uniprot.org/uniprot/P21826 P21826]
 
−
** [http://www.uniprot.org/uniprot/P37330 P37330]
 
−
** [http://www.uniprot.org/uniprot/P17432 P17432]
 
−
** [http://www.uniprot.org/uniprot/P17815 P17815]
 
−
** [http://www.uniprot.org/uniprot/P08997 P08997]
 
−
** [http://www.uniprot.org/uniprot/P21360 P21360]
 
−
** [http://www.uniprot.org/uniprot/P08216 P08216]
 
−
** [http://www.uniprot.org/uniprot/P13244 P13244]
 
−
** [http://www.uniprot.org/uniprot/P49081 P49081]
 
−
** [http://www.uniprot.org/uniprot/P45458 P45458]
 
−
** [http://www.uniprot.org/uniprot/O32913 O32913]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=malate synthase}}
 
−
{{#set: ec-number=ec-2.3.3.9}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=8}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:37, 5 January 2021

Reaction 2.7.11.24-RXN

  • direction:
    • reversible
  • common-name:
    • map kinase
    • protein kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN0-1483&oldid=77640"