Difference between revisions of "RXN0-1863"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9951 RXN-9951] == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overfl...")
(Created page with "Category:reaction == Reaction RXN0-1863 == * direction: ** reversible * common-name: ** udp-l-ara4o c-4" transaminase * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.92...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9951 RXN-9951] ==
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== Reaction RXN0-1863 ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
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** isocitrate dehydrogenase (nadp+)
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** udp-l-ara4o c-4" transaminase
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** nadp-dependent isocitrate dehydrogenase
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* ec-number:
−
* synonymous:
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** [http://enzyme.expasy.org/EC/2.6.1.92 ec-2.6.1.92]
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** idp
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** [http://enzyme.expasy.org/EC/2.6.1.87 ec-2.6.1.87]
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** nadp isocitric dehydrogenase
 
−
** idp1
 
−
** nadp+-icdh
 
−
** oxalsuccinic decarboxylase
 
−
** idh (ambiguous)
 
−
** isocitrate (nadp) dehydrogenase
 
−
** nadp-specific isocitrate dehydrogenase
 
−
** nadp+-linked isocitrate dehydrogenase
 
−
** nadp+-idh
 
−
** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 
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** isocitrate dehydrogenase (nadp-dependent)
 
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** nadp-linked isocitrate dehydrogenase
 
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** dual-cofactor-specific isocitrate dehydrogenase
 
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** oxalosuccinate decarboxylase
 
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** idp2
 
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** idp3
 
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** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 
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** nadp-dependent isocitric dehydrogenase
 
−
</div>
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADP]][c] '''+''' 1 [[THREO-DS-ISO-CITRATE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[UDP-4-AMINO-4-DEOXY-L-ARABINOSE]][c] '''<=>''' 1 [[5-BETA-L-THREO-PENTAPYRANOSYL-4-ULOSE-]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08749]]
+
* Gene: [[SJ12040]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-1338]], polymyxin resistance:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR105074
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25591 25591]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24713 24713]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01899 R01899]
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** [http://www.genome.jp/dbget-bin/www_bget?R07659 R07659]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
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{{#set: common-name=isocitrate dehydrogenase (nadp+)|nadp-dependent isocitrate dehydrogenase}}
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{{#set: common-name=udp-l-ara4o c-4" transaminase}}
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{{#set: synonymous=nadp-specific isocitrate dehydrogenase|nadp+-linked isocitrate dehydrogenase|idh (ambiguous)|isocitrate (nadp) dehydrogenase|nadp+-idh|idp3|oxalsuccinic decarboxylase|nadp-linked isocitrate dehydrogenase|idp1|nadp+-icdh|isocitrate dehydrogenase (nadp-dependent)|nadp isocitric dehydrogenase|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|idp2|dual-cofactor-specific isocitrate dehydrogenase|oxalosuccinate decarboxylase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|idp|nadp-dependent isocitric dehydrogenase}}
+
{{#set: ec-number=ec-2.6.1.87|ec-2.6.1.92}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN0-1863

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1338, polymyxin resistance:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR105074
  • RHEA:
  • LIGAND-RXN:





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