Difference between revisions of "RXN0-2141"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7431 PWY-7431] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction RXN0-2141 == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.expasy....")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7431 PWY-7431] ==
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== Reaction RXN0-2141 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** aromatic biogenic amine degradation (bacteria)
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-5821]]
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** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
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* [[RXN6666-4]]
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** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
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* [[RXN6666-5]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 1 [[Cis-delta-3-decenoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=OCTOPAMINE-DEHYDRATASE-RXN OCTOPAMINE-DEHYDRATASE-RXN]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8505 RXN-8505]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=SYNEPHRINE-DEHYDRATASE-RXN SYNEPHRINE-DEHYDRATASE-RXN]
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* Gene: [[SJ18059]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15198 RXN-15198]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.53-RXN 1.2.1.53-RXN]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: taxonomic-range=tax-2}}
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* Gene: [[SJ04443]]
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{{#set: common-name=aromatic biogenic amine degradation (bacteria)}}
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** Category: [[annotation]]
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{{#set: nb reaction found=3}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: completion rate=0.38}}
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** Category: [[orthology]]
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{{#set: nb total reaction=8}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10624]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ06617]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ15983]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ00005]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ15984]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY0-862]], (5Z)-dodecenoate biosynthesis I:
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7858]], (5Z)-dodecenoate biosynthesis II:
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR123134
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{{#set: direction=left-to-right}}
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{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179}}
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{{#set: nb gene associated=7}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN0-2141

  • direction:
    • left-to-right
  • common-name:
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-862, (5Z)-dodecenoate biosynthesis I:
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7858, (5Z)-dodecenoate biosynthesis II:
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123134

Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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