Difference between revisions of "RXN0-2142"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.52 ec-4.1.2.52] == Rea...") |
(Created page with "Category:reaction == Reaction RXN0-2142 == * direction: ** left-to-right * common-name: ** 3-oxo-cis-δ5-dodecenoyl-[acp] reductase ** 3-oxoacyl-[acyl-carrier-protein...") |
||
| (5 intermediate revisions by 3 users not shown) | |||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN0-2142 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** 3-oxo-cis-δ5-dodecenoyl-[acp] reductase | ||
| + | ** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph) | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[b-Hydroxy-cis-D5-dodecenoyl-ACPs]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ13014]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | |||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ04229]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ17743]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[ | + | * [[PWY0-862]], (5Z)-dodecenoate biosynthesis I: |
| − | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
| + | * [[PWY-7858]], (5Z)-dodecenoate biosynthesis II: | ||
| + | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
== External links == | == External links == | ||
| − | * | + | * METANETX-RXN : MNXR123135 |
| − | |||
| − | |||
| − | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: ec-number=ec- | + | {{#set: common-name=3-oxo-cis-δ5-dodecenoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}} |
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-1.1.1.100}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=3}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: nb pathway associated=2}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction category=orthology|annotation}} |
| + | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:24, 18 March 2021
Contents
Reaction RXN0-2142
- direction:
- left-to-right
- common-name:
- 3-oxo-cis-δ5-dodecenoyl-[acp] reductase
- 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
- ec-number:
Reaction formula
- 1 NADPH[c] + 1 PROTON[c] + 1 b-Keto-cis-D5-dodecenoyl-ACPs[c] => 1 NADP[c] + 1 b-Hydroxy-cis-D5-dodecenoyl-ACPs[c]
Gene(s) associated with this reaction
- Gene: SJ13014
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ04229
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ17743
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY0-862, (5Z)-dodecenoate biosynthesis I:
- 5 reactions found over 6 reactions in the full pathway
- PWY-7858, (5Z)-dodecenoate biosynthesis II:
- 4 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR123135
- Property "Common-name" (as page type) with input value "3-oxo-cis-δ5-dodecenoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
- Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
