Difference between revisions of "RXN0-2144"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16021 RXN-16021] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-152 RXN1F-152] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16021 RXN-16021] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-152 RXN1F-152] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
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** [http://enzyme.expasy.org/EC/1.14.15.q ec-1.14.15.q]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-17263]][c] '''=>''' 1 [[CPD-17264]][c] '''+''' 1 [[WATER]][c]
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* 1 [[CPD1F-129]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''+''' 4 [[PROTON]][c] '''+''' 4 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 4 [[Oxidized-ferredoxins]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00783]]
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* Gene: [[SJ07227]]
** Category: [[annotation]]
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** Category: [[manual]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
* Gene: [[SJ06882]]
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* Gene: [[SJ07228]]
** Category: [[annotation]]
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** Category: [[manual]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
 
** '''5''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of beta carotene into zeaxanthin (direct)
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R09747 R09747]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30334 30334]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-4.2.1.134}}
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{{#set: ec-number=ec-1.14.15.q}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=2}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=transformation of beta carotene into zeaxanthin (direct)}}
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=sjap}}

Revision as of 09:30, 27 August 2019

Reaction RXN1F-152

Reaction formula

Gene(s) associated with this reaction

  • Gene: SJ07227
    • Category: manual
      • Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
  • Gene: SJ07228
    • Category: manual
      • Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)

Pathway(s)

Reconstruction information

  • category: manual; source: sjap; tool: curation; comment: transformation of beta carotene into zeaxanthin (direct)

External links