Difference between revisions of "RXN0-2161"

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(Created page with "Category:reaction == Reaction HOMOSERINE-O-ACETYLTRANSFERASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.31 ec-2.3.1.31] == Reacti...")
(Created page with "Category:reaction == Reaction QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.29 ec-2.4.2.29] ==...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOMOSERINE-O-ACETYLTRANSFERASE-RXN ==
+
== Reaction QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.31 ec-2.3.1.31]
+
** [http://enzyme.expasy.org/EC/2.4.2.29 ec-2.4.2.29]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETYL-COA]][c] '''+''' 1 [[HOMO-SER]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-667]][c]
+
* 1 [[Guanine34-in-tRNAs]][c] '''+''' 1 [[QUEUINE]][c] '''=>''' 1 [[GUANINE]][c] '''+''' 1 [[tRNAs-with-queuine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ12245]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5344]], L-homocysteine biosynthesis:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13704 13704]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01776 R01776]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03789 R03789]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P08465 P08465]
+
** [http://www.uniprot.org/uniprot/P44594 P44594]
−
** [http://www.uniprot.org/uniprot/O60062 O60062]
+
** [http://www.uniprot.org/uniprot/Q9JVA4 Q9JVA4]
−
** [http://www.uniprot.org/uniprot/P94891 P94891]
+
** [http://www.uniprot.org/uniprot/O32053 O32053]
−
** [http://www.uniprot.org/uniprot/P12917 P12917]
+
** [http://www.uniprot.org/uniprot/P0A847 P0A847]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/Q57878 Q57878]
−
{{#set: ec-number=ec-2.3.1.31}}
+
** [http://www.uniprot.org/uniprot/O28787 O28787]
−
{{#set: nb gene associated=0}}
+
** [http://www.uniprot.org/uniprot/P54578 P54578]
−
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/Q9PNT0 Q9PNT0]
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.uniprot.org/uniprot/O67331 O67331]
−
{{#set: reconstruction tool=meneco}}
+
** [http://www.uniprot.org/uniprot/Q9CJ54 Q9CJ54]
−
{{#set: reconstruction comment=added for gapfilling}}
+
** [http://www.uniprot.org/uniprot/P40826 P40826]
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
** [http://www.uniprot.org/uniprot/Q55983 Q55983]
 +
** [http://www.uniprot.org/uniprot/Q17361 Q17361]
 +
{{#set: direction=left-to-right}}
 +
{{#set: ec-number=ec-2.4.2.29}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:35, 5 January 2021

Reaction QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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