Difference between revisions of "RXN0-2381"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-28889 tax-2...")
(Created page with "Category:reaction == Reaction RXN0-2381 == * direction: ** reversible * common-name: ** indoleglycerol phosphate aldolase * ec-number: ** [http://enzyme.expasy.org/EC/4.1....")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] ==
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== Reaction RXN0-2381 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-28889 tax-28889]
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** reversible
 
* common-name:
 
* common-name:
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** 3-hydroxypropanoate/4-hydroxybutanate cycle
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** indoleglycerol phosphate aldolase
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== Reaction(s) found ==
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* ec-number:
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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** [http://enzyme.expasy.org/EC/4.1.2.8 ec-4.1.2.8]
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* [[BIOTIN-CARBOXYL-RXN]]
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== Reaction formula ==
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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* 1 [[INDOLE-3-GLYCEROL-P]][c] '''<=>''' 1 [[GAP]][c] '''+''' 1 [[INDOLE]][c]
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* [[RXN-11662]]
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== Gene(s) associated with this reaction  ==
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* [[RXN-11667]]
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* Gene: [[SJ09991]]
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* [[RXN-6383]]
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** Category: [[annotation]]
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* [[RXN0-5055]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN0-5224]]
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** Category: [[orthology]]
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== Reaction(s) not found ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8974 RXN-8974]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11002 RXN-11002]
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* Gene: [[SJ16706]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8890 RXN-8890]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8963 RXN-8963]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9092 RXN-9092]
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* Gene: [[SJ15468]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9086 RXN-9086]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8891 RXN-8891]
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* Gene: [[SJ10955]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9087 RXN-9087]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: taxonomic-range=tax-28889}}
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* Gene: [[SJ20325]]
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{{#set: common-name=3-hydroxypropanoate/4-hydroxybutanate cycle}}
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** Category: [[orthology]]
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{{#set: nb reaction found=8}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: completion rate=0.44}}
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== Pathway(s)  ==
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{{#set: nb total reaction=18}}
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* [[PWY-6949]], DIBOA-glucoside biosynthesis:
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[TRPSYN-PWY]], L-tryptophan biosynthesis:
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR99889
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02340 R02340]
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14084 14084]
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{{#set: direction=reversible}}
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{{#set: common-name=indoleglycerol phosphate aldolase}}
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{{#set: ec-number=ec-4.1.2.8}}
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{{#set: nb gene associated=5}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN0-2381

  • direction:
    • reversible
  • common-name:
    • indoleglycerol phosphate aldolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6949, DIBOA-glucoside biosynthesis:
    • 1 reactions found over 6 reactions in the full pathway
  • TRPSYN-PWY, L-tryptophan biosynthesis:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR99889
  • LIGAND-RXN:
  • RHEA:





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