Difference between revisions of "RXN0-2381"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-762 PWY-762] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-330...") |
(Created page with "Category:reaction == Reaction RXN0-2381 == * direction: ** reversible * common-name: ** indoleglycerol phosphate aldolase * ec-number: ** [http://enzyme.expasy.org/EC/4.1....") |
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| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction RXN0-2381 == |
| − | * | + | * direction: |
| − | ** | + | ** reversible |
* common-name: | * common-name: | ||
| − | ** | + | ** indoleglycerol phosphate aldolase |
| − | == Reaction(s) | + | * ec-number: |
| − | * [[ | + | ** [http://enzyme.expasy.org/EC/4.1.2.8 ec-4.1.2.8] |
| − | * [[ | + | == Reaction formula == |
| − | * [[ | + | * 1 [[INDOLE-3-GLYCEROL-P]][c] '''<=>''' 1 [[GAP]][c] '''+''' 1 [[INDOLE]][c] |
| − | * [[ | + | == Gene(s) associated with this reaction == |
| − | * [[ | + | * Gene: [[SJ09991]] |
| − | * [[ | + | ** Category: [[annotation]] |
| − | * [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * [[ | + | ** Category: [[orthology]] |
| − | * [[ | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * [[ | + | * Gene: [[SJ16706]] |
| − | * [[ | + | ** Category: [[orthology]] |
| − | * [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * [[ | + | * Gene: [[SJ15468]] |
| − | * [[ | + | ** Category: [[orthology]] |
| − | * [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * [[ | + | * Gene: [[SJ10955]] |
| − | * [[ | + | ** Category: [[orthology]] |
| − | * [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | == | + | * Gene: [[SJ20325]] |
| − | * [http:// | + | ** Category: [[orthology]] |
| − | * [http:// | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | {{#set: | + | == Pathway(s) == |
| − | {{#set: common-name= | + | * [[PWY-6949]], DIBOA-glucoside biosynthesis: |
| − | {{#set: nb | + | ** '''1''' reactions found over '''6''' reactions in the full pathway |
| − | {{#set: | + | * [[TRPSYN-PWY]], L-tryptophan biosynthesis: |
| − | {{#set: | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
| + | == Reconstruction information == | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == External links == | ||
| + | * METANETX-RXN : MNXR99889 | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02340 R02340] | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14084 14084] | ||
| + | {{#set: direction=reversible}} | ||
| + | {{#set: common-name=indoleglycerol phosphate aldolase}} | ||
| + | {{#set: ec-number=ec-4.1.2.8}} | ||
| + | {{#set: nb gene associated=5}} | ||
| + | {{#set: nb pathway associated=2}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | ||
Latest revision as of 11:23, 18 March 2021
Contents
Reaction RXN0-2381
- direction:
- reversible
- common-name:
- indoleglycerol phosphate aldolase
- ec-number:
Reaction formula
- 1 INDOLE-3-GLYCEROL-P[c] <=> 1 GAP[c] + 1 INDOLE[c]
Gene(s) associated with this reaction
- Gene: SJ09991
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ16706
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ15468
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ10955
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ20325
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-6949, DIBOA-glucoside biosynthesis:
- 1 reactions found over 6 reactions in the full pathway
- TRPSYN-PWY, L-tryptophan biosynthesis:
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
