Difference between revisions of "RXN0-2584"

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(Created page with "Category:reaction == Reaction ALGINATE-SYNTHASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.33 ec-2.4.1.33] == Reaction formula...")
(Created page with "Category:reaction == Reaction RXN0-2584 == * direction: ** left-to-right * common-name: ** uracil-dna glycosylase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.2.27 ec-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ALGINATE-SYNTHASE-RXN ==
+
== Reaction RXN0-2584 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** uracil-dna glycosylase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.4.1.33 ec-2.4.1.33]
+
** [http://enzyme.expasy.org/EC/3.2.2.27 ec-3.2.2.27]
 
== Reaction formula ==
 
== Reaction formula ==
* n [[CPD-1828]][c] '''=>''' n [[GDP]][c] '''+''' n [[PROTON]][c] '''+''' 1 [[Poly-beta-D-Mannuronate]][c]
+
* 1 [[DNA-with-Uracils]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DNA-containing-a-Apyrimidinic-Sites]][c] '''+''' 1 [[URACIL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ03435]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19780]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19782]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6082]], alginate biosynthesis II (bacterial):
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6073]], alginate biosynthesis I (algal):
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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* METANETX-RXN : MNXR123144
** [http://www.genome.jp/dbget-bin/www_bget?R03129 R03129]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.4.1.33}}
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{{#set: common-name=uracil-dna glycosylase}}
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-3.2.2.27}}
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=3}}
{{#set: reconstruction category=gap-filling}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN0-2584

  • direction:
    • left-to-right
  • common-name:
    • uracil-dna glycosylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123144