Difference between revisions of "RXN0-2601"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1224 tax-12...")
 
(Created page with "Category:reaction == Reaction RXN0-2601 == * direction: ** left-to-right * common-name: ** dna-(apurinic or apyrimidinic site) lyase ** dna glycosylase * ec-number: ** [ht...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103] ==
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== Reaction RXN0-2601 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1224 tax-1224]
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** left-to-right
 
* common-name:
 
* common-name:
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** l-isoleucine biosynthesis iii
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** dna-(apurinic or apyrimidinic site) lyase
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== Reaction(s) found ==
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** dna glycosylase
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* [[ACETOOHBUTREDUCTOISOM-RXN]]
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* ec-number:
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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** [http://enzyme.expasy.org/EC/4.2.99.18 ec-4.2.99.18]
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* [[DIHYDROXYMETVALDEHYDRAT-RXN]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 1 [[Damaged-DNA-Pyrimidine]][c] '''=>''' 1 [[DNA-containing-a-Apyrimidinic-Sites]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTSYN-RXN ACETOOHBUTSYN-RXN]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7746 RXN-7746]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-MUTASE-RXN METHYLASPARTATE-MUTASE-RXN]
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* Gene: [[SJ01041]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7751 RXN-7751]
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** Category: [[orthology]]
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{{#set: taxonomic-range=tax-1224}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=l-isoleucine biosynthesis iii}}
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* Gene: [[SJ12112]]
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{{#set: nb reaction found=3}}
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** Category: [[orthology]]
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{{#set: completion rate=0.43}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb total reaction=7}}
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* Gene: [[SJ17648]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ01489]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10690]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12532]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ04992]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ04314]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12201]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ00230]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12275]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ18415]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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</div>
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== Pathway(s)  ==
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR123145
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{{#set: direction=left-to-right}}
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{{#set: common-name=dna glycosylase|dna-(apurinic or apyrimidinic site) lyase}}
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{{#set: ec-number=ec-4.2.99.18}}
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{{#set: nb gene associated=12}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN0-2601

  • direction:
    • left-to-right
  • common-name:
    • dna-(apurinic or apyrimidinic site) lyase
    • dna glycosylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123145





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