Difference between revisions of "RXN0-308"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] == * direction: ** left-to-right * common-name: ** heme oxygenase * ec-number:...")
(Created page with "Category:reaction == Reaction RXN0-308 == * direction: ** left-to-right * common-name: ** l-cysteine:[protein cysteine] sulfurtransferase * ec-number: ** [http://enzyme.ex...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] ==
+
== Reaction RXN0-308 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** heme oxygenase
+
** l-cysteine:[protein cysteine] sulfurtransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.15.20 ec-1.14.15.20]
+
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 8 [[PROTON]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[FE+2]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 3 [[WATER]][c]
+
* 1 [[CYS]][c] '''+''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[L-Cysteine-Desulfurase-persulfide]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20370]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ09474]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19133]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17324]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13485]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04060]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03223]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7578]], phycoviolobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7578 PWY-7578]
+
* [[PWY0-1021]], L-alanine biosynthesis III:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7892]], tRNA-uridine 2-thiolation and selenation (bacteria):
 +
** '''3''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6891]], thiazole component of thiamine diphosphate biosynthesis II:
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6892]], thiazole component of thiamine diphosphate biosynthesis I:
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7904]], tRNA-uridine 2-thiolation (thermophilic bacteria):
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7891]], tRNA-uridine 2-thiolation (yeast mitochondria):
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7170]], phytochromobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7170 PWY-7170]
+
* [[PWY-7889]], tRNA-uridine 2-thiolation (mammalian mitochondria):
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7845]], heme degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7845 PWY-7845]
+
* [[PWY-7888]], tRNA-uridine 2-thiolation (cytoplasmic):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5917]], phycocyanobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5917 PWY-5917]
+
* [[PWY-6823]], molybdopterin biosynthesis:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''7''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7580]], phycoerythrobilin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7580 PWY-7580]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR123163
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50233 50233]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17458 17458]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=heme oxygenase}}
+
{{#set: common-name=l-cysteine:[protein cysteine] sulfurtransferase}}
−
{{#set: ec-number=ec-1.14.15.20}}
+
{{#set: ec-number=ec-2.8.1.7}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=9}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN0-308

  • direction:
    • left-to-right
  • common-name:
    • l-cysteine:[protein cysteine] sulfurtransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1021, L-alanine biosynthesis III:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7892, tRNA-uridine 2-thiolation and selenation (bacteria):
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-6891, thiazole component of thiamine diphosphate biosynthesis II:
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6892, thiazole component of thiamine diphosphate biosynthesis I:
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7904, tRNA-uridine 2-thiolation (thermophilic bacteria):
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7891, tRNA-uridine 2-thiolation (yeast mitochondria):
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7889, tRNA-uridine 2-thiolation (mammalian mitochondria):
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7888, tRNA-uridine 2-thiolation (cytoplasmic):
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6823, molybdopterin biosynthesis:
    • 7 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123163
  • RHEA:
  • LIGAND-RXN:

Property "Common-name" (as page type) with input value "l-cysteine:[protein cysteine] sulfurtransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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