Difference between revisions of "RXN0-308"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15117 RXN-15117] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] == * direction: ** left-to-right * common-name: ** heme oxygenase * ec-number:...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15117 RXN-15117] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** heme oxygenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.315 ec-2.4.1.315]
+
** [http://enzyme.expasy.org/EC/1.14.15.20 ec-1.14.15.20]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12575]][c] '''+''' 1 [[D-Glucosyl-12-diacyl-glycerols]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[diacyl-3-O-glucl-1-6-gluc-sn-glycerol]][c]
+
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 8 [[PROTON]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[FE+2]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 3 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ20370]]
−
* Gene: [[SJ17513]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19257]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17680]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07490]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19145]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21662]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13674]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10727]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06688]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11238]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02934]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18634]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19084]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
+
* [[PWY-7578]], phycoviolobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7578 PWY-7578]
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7170]], phytochromobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7170 PWY-7170]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7845]], heme degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7845 PWY-7845]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5917]], phycocyanobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5917 PWY-5917]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7580]], phycoerythrobilin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7580 PWY-7580]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50233 50233]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.4.1.315}}
+
{{#set: common-name=heme oxygenase}}
−
{{#set: nb gene associated=13}}
+
{{#set: ec-number=ec-1.14.15.20}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=7}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:28, 26 August 2019

Reaction RXN-17523

  • direction:
    • left-to-right
  • common-name:
    • heme oxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7578, phycoviolobilin biosynthesis: PWY-7578
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7170, phytochromobilin biosynthesis: PWY-7170
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7845, heme degradation II: PWY-7845
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5917, phycocyanobilin biosynthesis: PWY-5917
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5915, phycoerythrobilin biosynthesis I: PWY-5915
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7580, phycoerythrobilin biosynthesis II: PWY-7580
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7579, phycourobilin biosynthesis: PWY-7579
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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