Difference between revisions of "RXN0-308"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] == * direction: ** left-to-right * common-name: ** heme oxygenase * ec-number:...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9557 RXN-9557] == * direction: ** left-to-right * common-name: ** 3-hydroxy-cis-vaccenoyl-[acyl...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9557 RXN-9557] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** heme oxygenase
+
** 3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase
 +
** 3-hydroxy cis vaccenoyl-[acp] dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.15.20 ec-1.14.15.20]
+
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 8 [[PROTON]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[FE+2]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 3 [[WATER]][c]
+
* 1 [[R-3-hydroxy-cis-vaccenoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[cis-vaccen-2-enoyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20370]]
+
* Gene: [[SJ10275]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7578]], phycoviolobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7578 PWY-7578]
+
* [[PWY-5973]], cis-vaccenate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5973 PWY-5973]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7170]], phytochromobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7170 PWY-7170]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7845]], heme degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7845 PWY-7845]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5917]], phycocyanobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5917 PWY-5917]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7580]], phycoerythrobilin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7580 PWY-7580]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50233 50233]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=heme oxygenase}}
+
{{#set: common-name=3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase|3-hydroxy cis vaccenoyl-[acp] dehydratase}}
−
{{#set: ec-number=ec-1.14.15.20}}
+
{{#set: ec-number=ec-4.2.1.59}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction RXN-9557

  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase
    • 3-hydroxy cis vaccenoyl-[acp] dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5973, cis-vaccenate biosynthesis: PWY-5973
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-hydroxy cis vaccenoyl-[acp] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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