Difference between revisions of "RXN0-4261"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.25.1-RXN 3.4.25.1-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction RXN0-4261 == * direction: ** left-to-right == Reaction formula == * 1 ATP[c] '''+''' 1 Supercoiled-Duplex-DNAs[c] '''+''' 1 WATER...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.25.1-RXN 3.4.25.1-RXN] ==
+
== Reaction RXN0-4261 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.4.25.1 ec-3.4.25.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Supercoiled-Duplex-DNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[Single-Stranded-DNAs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ13597]]
−
* Gene: [[SJ19380]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21371]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ03239]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05254]]
+
* Gene: [[SJ03082]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05154]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01422]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20471]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ22206]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14598]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07403]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01745]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01731]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ19146]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13891]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ22180]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02909]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ07036]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ19736]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21105]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21621]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20307]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14712]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10772]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00010]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ08098]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ07149]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08597]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ16267]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13417]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20163]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10684]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ01580]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ19500]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ07129]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00759]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ11002]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18021]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR123180
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q7DLR9 Q7DLR9]
 
−
** [http://www.uniprot.org/uniprot/P28062 P28062]
 
−
** [http://www.uniprot.org/uniprot/Q9TRJ7 Q9TRJ7]
 
−
** [http://www.uniprot.org/uniprot/P30656 P30656]
 
−
** [http://www.uniprot.org/uniprot/P30657 P30657]
 
−
** [http://www.uniprot.org/uniprot/P28074 P28074]
 
−
** [http://www.uniprot.org/uniprot/P40302 P40302]
 
−
** [http://www.uniprot.org/uniprot/O24633 O24633]
 
−
** [http://www.uniprot.org/uniprot/P40303 P40303]
 
−
** [http://www.uniprot.org/uniprot/Q9V122 Q9V122]
 
−
** [http://www.uniprot.org/uniprot/P40306 P40306]
 
−
** [http://www.uniprot.org/uniprot/P28063 P28063]
 
−
** [http://www.uniprot.org/uniprot/P25786 P25786]
 
−
** [http://www.uniprot.org/uniprot/P28076 P28076]
 
−
** [http://www.uniprot.org/uniprot/O13268 O13268]
 
−
** [http://www.uniprot.org/uniprot/P34064 P34064]
 
−
** [http://www.uniprot.org/uniprot/P60901 P60901]
 
−
** [http://www.uniprot.org/uniprot/P18421 P18421]
 
−
** [http://www.uniprot.org/uniprot/P18053 P18053]
 
−
** [http://www.uniprot.org/uniprot/P28072 P28072]
 
−
** [http://www.uniprot.org/uniprot/P22769 P22769]
 
−
** [http://www.uniprot.org/uniprot/P25043 P25043]
 
−
** [http://www.uniprot.org/uniprot/P28065 P28065]
 
−
** [http://www.uniprot.org/uniprot/P30186 P30186]
 
−
** [http://www.uniprot.org/uniprot/P60900 P60900]
 
−
** [http://www.uniprot.org/uniprot/P34065 P34065]
 
−
** [http://www.uniprot.org/uniprot/P34067 P34067]
 
−
** [http://www.uniprot.org/uniprot/P40301 P40301]
 
−
** [http://www.uniprot.org/uniprot/Q8AVD2 Q8AVD2]
 
−
** [http://www.uniprot.org/uniprot/Q7LZF1 Q7LZF1]
 
−
** [http://www.uniprot.org/uniprot/P40307 P40307]
 
−
** [http://www.uniprot.org/uniprot/P23724 P23724]
 
−
** [http://www.uniprot.org/uniprot/P28070 P28070]
 
−
** [http://www.uniprot.org/uniprot/P22141 P22141]
 
−
** [http://www.uniprot.org/uniprot/P49721 P49721]
 
−
** [http://www.uniprot.org/uniprot/P49720 P49720]
 
−
** [http://www.uniprot.org/uniprot/P25156 P25156]
 
−
** [http://www.uniprot.org/uniprot/Q09682 Q09682]
 
−
** [http://www.uniprot.org/uniprot/Q09720 Q09720]
 
−
** [http://www.uniprot.org/uniprot/P48004 P48004]
 
−
** [http://www.uniprot.org/uniprot/P38624 P38624]
 
−
** [http://www.uniprot.org/uniprot/P32379 P32379]
 
−
** [http://www.uniprot.org/uniprot/Q7LZF0 Q7LZF0]
 
−
** [http://www.uniprot.org/uniprot/P62333 P62333]
 
−
** [http://www.uniprot.org/uniprot/Q24178 Q24178]
 
−
** [http://www.uniprot.org/uniprot/Q27575 Q27575]
 
−
** [http://www.uniprot.org/uniprot/P21242 P21242]
 
−
** [http://www.uniprot.org/uniprot/P21243 P21243]
 
−
** [http://www.uniprot.org/uniprot/P23638 P23638]
 
−
** [http://www.uniprot.org/uniprot/P23639 P23639]
 
−
** [http://www.uniprot.org/uniprot/P12881 P12881]
 
−
** [http://www.uniprot.org/uniprot/P25787 P25787]
 
−
** [http://www.uniprot.org/uniprot/P20618 P20618]
 
−
** [http://www.uniprot.org/uniprot/P25788 P25788]
 
−
** [http://www.uniprot.org/uniprot/P25789 P25789]
 
−
** [http://www.uniprot.org/uniprot/P18420 P18420]
 
−
** [http://www.uniprot.org/uniprot/P18422 P18422]
 
−
** [http://www.uniprot.org/uniprot/P21670 P21670]
 
−
** [http://www.uniprot.org/uniprot/P52428 P52428]
 
−
** [http://www.uniprot.org/uniprot/P93395 P93395]
 
−
** [http://www.uniprot.org/uniprot/O04861 O04861]
 
−
** [http://www.uniprot.org/uniprot/Q8LD27 Q8LD27]
 
−
** [http://www.uniprot.org/uniprot/O48551 O48551]
 
−
** [http://www.uniprot.org/uniprot/O24030 O24030]
 
−
** [http://www.uniprot.org/uniprot/P42742 P42742]
 
−
** [http://www.uniprot.org/uniprot/O81147 O81147]
 
−
** [http://www.uniprot.org/uniprot/O23708 O23708]
 
−
** [http://www.uniprot.org/uniprot/O24616 O24616]
 
−
** [http://www.uniprot.org/uniprot/O81149 O81149]
 
−
** [http://www.uniprot.org/uniprot/Q42134 Q42134]
 
−
** [http://www.uniprot.org/uniprot/P34066 P34066]
 
−
** [http://www.uniprot.org/uniprot/O23712 O23712]
 
−
** [http://www.uniprot.org/uniprot/O23710 O23710]
 
−
** [http://www.uniprot.org/uniprot/Q7DLS1 Q7DLS1]
 
−
** [http://www.uniprot.org/uniprot/O81153 O81153]
 
−
** [http://www.uniprot.org/uniprot/O23714 O23714]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-3.4.25.1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=37}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN0-4261

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123180




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