Difference between revisions of "RXN0-4961"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-...")
(Created page with "Category:reaction == Reaction LEUCINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** leucine-trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY] ==
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== Reaction LEUCINE--TRNA-LIGASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
 
* common-name:
 
* common-name:
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** l-proline degradation
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** leucine-trna ligase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-14116]]
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** [http://enzyme.expasy.org/EC/6.1.1.4 ec-6.1.1.4]
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* [[RXN-14903]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 1 [[ATP]][c] '''+''' 1 [[LEU]][c] '''+''' 1 [[LEU-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[PPI]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=SPONTPRO-RXN SPONTPRO-RXN]
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-2759|tax-2157|tax-2}}
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* Gene: [[SJ12222]]
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{{#set: common-name=l-proline degradation}}
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** Category: [[annotation]]
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{{#set: nb reaction found=2}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=0.67}}
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* Gene: [[SJ12219]]
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{{#set: nb total reaction=3}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12220]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ16362]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11689 11689]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/O27552 O27552]
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** [http://www.uniprot.org/uniprot/P56457 P56457]
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** [http://www.uniprot.org/uniprot/O51267 O51267]
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** [http://www.uniprot.org/uniprot/O83595 O83595]
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** [http://www.uniprot.org/uniprot/O84211 O84211]
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** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930]
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** [http://www.uniprot.org/uniprot/P47508 P47508]
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** [http://www.uniprot.org/uniprot/P36430 P36430]
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** [http://www.uniprot.org/uniprot/O66680 O66680]
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** [http://www.uniprot.org/uniprot/O67646 O67646]
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** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1]
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** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15]
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** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3]
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** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39]
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** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63]
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** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2]
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** [http://www.uniprot.org/uniprot/P43827 P43827]
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** [http://www.uniprot.org/uniprot/O58698 O58698]
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** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6]
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** [http://www.uniprot.org/uniprot/P26637 P26637]
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** [http://www.uniprot.org/uniprot/P75398 P75398]
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** [http://www.uniprot.org/uniprot/P73274 P73274]
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** [http://www.uniprot.org/uniprot/Q48955 Q48955]
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** [http://www.uniprot.org/uniprot/Q48964 Q48964]
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** [http://www.uniprot.org/uniprot/Q49051 Q49051]
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** [http://www.uniprot.org/uniprot/P11325 P11325]
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** [http://www.uniprot.org/uniprot/P07813 P07813]
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** [http://www.uniprot.org/uniprot/P10857 P10857]
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** [http://www.uniprot.org/uniprot/P15181 P15181]
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** [http://www.uniprot.org/uniprot/Q50192 Q50192]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=leucine-trna ligase}}
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{{#set: ec-number=ec-6.1.1.4}}
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{{#set: nb gene associated=4}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:46, 18 December 2020

Reaction LEUCINE--TRNA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • leucine-trna ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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