Difference between revisions of "RXN0-4961"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-...") |
(Created page with "Category:reaction == Reaction LEUCINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** leucine-trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction LEUCINE--TRNA-LIGASE-RXN == |
− | * | + | * direction: |
− | ** | + | ** left-to-right |
− | |||
− | |||
* common-name: | * common-name: | ||
− | ** | + | ** leucine-trna ligase |
− | == Reaction(s) | + | * ec-number: |
− | * [[ | + | ** [http://enzyme.expasy.org/EC/6.1.1.4 ec-6.1.1.4] |
− | * [[ | + | == Reaction formula == |
− | == | + | * 1 [[ATP]][c] '''+''' 1 [[LEU]][c] '''+''' 1 [[LEU-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[PPI]][c] |
− | * [http:// | + | == Gene(s) associated with this reaction == |
− | {{#set: | + | * Gene: [[SJ12222]] |
− | {{#set: common-name= | + | ** Category: [[annotation]] |
− | {{#set: nb | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | {{#set: | + | * Gene: [[SJ12219]] |
− | {{#set: | + | ** Category: [[annotation]] |
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ12220]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ16362]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | == Pathway(s) == | ||
+ | * [[TRNA-CHARGING-PWY]], tRNA charging: | ||
+ | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11689 11689] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/O27552 O27552] | ||
+ | ** [http://www.uniprot.org/uniprot/P56457 P56457] | ||
+ | ** [http://www.uniprot.org/uniprot/O51267 O51267] | ||
+ | ** [http://www.uniprot.org/uniprot/O83595 O83595] | ||
+ | ** [http://www.uniprot.org/uniprot/O84211 O84211] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930] | ||
+ | ** [http://www.uniprot.org/uniprot/P47508 P47508] | ||
+ | ** [http://www.uniprot.org/uniprot/P36430 P36430] | ||
+ | ** [http://www.uniprot.org/uniprot/O66680 O66680] | ||
+ | ** [http://www.uniprot.org/uniprot/O67646 O67646] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2] | ||
+ | ** [http://www.uniprot.org/uniprot/P43827 P43827] | ||
+ | ** [http://www.uniprot.org/uniprot/O58698 O58698] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6] | ||
+ | ** [http://www.uniprot.org/uniprot/P26637 P26637] | ||
+ | ** [http://www.uniprot.org/uniprot/P75398 P75398] | ||
+ | ** [http://www.uniprot.org/uniprot/P73274 P73274] | ||
+ | ** [http://www.uniprot.org/uniprot/Q48955 Q48955] | ||
+ | ** [http://www.uniprot.org/uniprot/Q48964 Q48964] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49051 Q49051] | ||
+ | ** [http://www.uniprot.org/uniprot/P11325 P11325] | ||
+ | ** [http://www.uniprot.org/uniprot/P07813 P07813] | ||
+ | ** [http://www.uniprot.org/uniprot/P10857 P10857] | ||
+ | ** [http://www.uniprot.org/uniprot/P15181 P15181] | ||
+ | ** [http://www.uniprot.org/uniprot/Q50192 Q50192] | ||
+ | </div> | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=leucine-trna ligase}} | ||
+ | {{#set: ec-number=ec-6.1.1.4}} | ||
+ | {{#set: nb gene associated=4}} | ||
+ | {{#set: nb pathway associated=1}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 20:46, 18 December 2020
Contents
Reaction LEUCINE--TRNA-LIGASE-RXN
- direction:
- left-to-right
- common-name:
- leucine-trna ligase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ12222
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ12219
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ12220
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ16362
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- TRNA-CHARGING-PWY, tRNA charging:
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links