Difference between revisions of "RXN0-5021"

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(Created page with "Category:reaction == Reaction RXN-11486 == * direction: ** left-to-right * common-name: ** trans-octaprenyltranstransferase * ec-number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:reaction == Reaction RXN0-5021 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.af ec-2.7.7.af] == Reaction formula == * n Ri...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11486 ==
+
== Reaction RXN0-5021 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** trans-octaprenyltranstransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.5.1.85 ec-2.5.1.85]
+
** [http://enzyme.expasy.org/EC/2.7.7.af ec-2.7.7.af]
 
== Reaction formula ==
 
== Reaction formula ==
* 5 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 5 [[PPI]][c] '''+''' 1 [[SOLANESYL-PYROPHOSPHATE]][c]
+
* n [[Ribonucleoside-Triphosphates]][c] '''+''' 1 [[Single-Stranded-DNAs]][c] '''=>''' n-1 [[PPI]][c] '''+''' 1 [[ssDNA-RNA-primer-hybrid]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ10418]]
+
* Gene: [[SJ01693]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ19255]]
+
* Gene: [[SJ21402]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06758]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6520]], nonaprenyl diphosphate biosynthesis II:
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
* METANETX-RXN : MNXR123186
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27595 27595]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R09251 R09251]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=trans-octaprenyltranstransferase}}
+
{{#set: ec-number=ec-2.7.7.af}}
{{#set: ec-number=ec-2.5.1.85}}
+
{{#set: nb gene associated=3}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN0-5021

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123186