Difference between revisions of "RXN0-5055"

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(Created page with "Category:reaction == Reaction RXN-10642 == * direction: ** left-to-right * common-name: ** uroporphyrinogen i decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4....")
(Created page with "Category:reaction == Reaction TransportSeed-COB-I-ALAMIN == * direction: ** left-to-right == Reaction formula == * 1.0 COB-I-ALAMIN[e] '''=>''' 1.0 COB-I-ALAMIN[c]...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-10642 ==
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== Reaction TransportSeed-COB-I-ALAMIN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** uroporphyrinogen i decarboxylase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.1.1.37 ec-4.1.1.37]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-11444]][c] '''+''' 4 [[PROTON]][c] '''=>''' 4 [[CARBON-DIOXIDE]][c] '''+''' 1 [[COPROPORPHYRINOGEN_I]][c]
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* 1.0 [[COB-I-ALAMIN]][e] '''=>''' 1.0 [[COB-I-ALAMIN]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ09367]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ09370]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ03594]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31239 31239]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04972 R04972]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=uroporphyrinogen i decarboxylase}}
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{{#set: nb gene associated=0}}
{{#set: ec-number=ec-4.1.1.37}}
 
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=import_from_medium}}

Revision as of 11:23, 15 January 2021

Reaction TransportSeed-COB-I-ALAMIN

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links