Difference between revisions of "RXN0-5063"

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(Created page with "Category:reaction == Reaction 2.7.7.15-RXN == * direction: ** left-to-right * common-name: ** choline-phosphate cytidylyltransferase * ec-number: ** [http://enzyme.expasy....")
(Created page with "Category:reaction == Reaction RXN-16149 == * direction: ** left-to-right * common-name: ** ricinoleoyl-lipid 15-desaturase * ec-number: ** [http://enzyme.expasy.org/EC/1.1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.7.7.15-RXN ==
+
== Reaction RXN-16149 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** choline-phosphate cytidylyltransferase
+
** ricinoleoyl-lipid 15-desaturase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.15 ec-2.7.7.15]
+
** [http://enzyme.expasy.org/EC/1.14.19.25 ec-1.14.19.25]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CTP]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CDP-CHOLINE]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CPD-17396]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-17397]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19268]]
+
* Gene: [[SJ09228]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03069]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7886]], cell-surface glycoconjugate-linked phosphocholine biosynthesis:
+
* [[PWY-6433]], hydroxylated fatty acid biosynthesis (plants):
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''17''' reactions found over '''22''' reactions in the full pathway
−
* [[PWY3O-450]], phosphatidylcholine biosynthesis I:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-3561]], choline biosynthesis III:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae):
 
−
** '''2''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY4FS-2]], phosphatidylcholine biosynthesis II:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7782]], plasmalogen biosynthesis:
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18998 18998]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01890 R01890]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P19836 P19836]
 
−
** [http://www.uniprot.org/uniprot/P49586 P49586]
 
−
** [http://www.uniprot.org/uniprot/P49584 P49584]
 
−
** [http://www.uniprot.org/uniprot/P49585 P49585]
 
−
** [http://www.uniprot.org/uniprot/P49587 P49587]
 
−
** [http://www.uniprot.org/uniprot/P93470 P93470]
 
−
** [http://www.uniprot.org/uniprot/Q42619 Q42619]
 
−
** [http://www.uniprot.org/uniprot/Q42620 Q42620]
 
−
** [http://www.uniprot.org/uniprot/Q42621 Q42621]
 
−
** [http://www.uniprot.org/uniprot/Q42622 Q42622]
 
−
** [http://www.uniprot.org/uniprot/P13259 P13259]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=choline-phosphate cytidylyltransferase}}
+
{{#set: common-name=ricinoleoyl-lipid 15-desaturase}}
−
{{#set: ec-number=ec-2.7.7.15}}
+
{{#set: ec-number=ec-1.14.19.25}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:31, 5 January 2021

Reaction RXN-16149

  • direction:
    • left-to-right
  • common-name:
    • ricinoleoyl-lipid 15-desaturase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6433, hydroxylated fatty acid biosynthesis (plants):
    • 17 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN0-5063&oldid=74875"