Difference between revisions of "RXN0-5131"

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(Created page with "Category:reaction == Reaction RIBITOL-2-DEHYDROGENASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.56 ec-1.1.1.56] == Reaction form...")
(Created page with "Category:reaction == Reaction RXN-12755 == * direction: ** left-to-right * common-name: ** arachidonate δ17 desaturase ** arachidonoyl-lipid ω3 desaturase * ec...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RIBITOL-2-DEHYDROGENASE-RXN ==
+
== Reaction RXN-12755 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** arachidonate δ17 desaturase
 +
** arachidonoyl-lipid ω3 desaturase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.56 ec-1.1.1.56]
+
** [http://enzyme.expasy.org/EC/1.14.19.25 ec-1.14.19.25]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[RIBITOL]][c] '''<=>''' 1 [[D-RIBULOSE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-17284]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-17282]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ03069]]
−
* Gene: [[SJ14725]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* Gene: [[SJ09228]]
−
* Gene: [[SJ12355]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03883]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ12574]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14724]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14723]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21226]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04229]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[RIBITOLUTIL-PWY]], ribitol degradation:
+
* [[PWY-6940]], icosapentaenoate biosynthesis VI (fungi):
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20053 20053]
+
{{#set: common-name=arachidonoyl-lipid &omega;3 desaturase|arachidonate &delta;17 desaturase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.14.19.25}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01895 R01895]
+
{{#set: nb gene associated=2}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P00335 P00335]
 
−
{{#set: direction=reversible}}
 
−
{{#set: ec-number=ec-1.1.1.56}}
 
−
{{#set: nb gene associated=8}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:15, 14 January 2021

Reaction RXN-12755

  • direction:
    • left-to-right
  • common-name:
    • arachidonate δ17 desaturase
    • arachidonoyl-lipid ω3 desaturase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6940, icosapentaenoate biosynthesis VI (fungi):
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN0-5131&oldid=88939"