Difference between revisions of "RXN0-5180"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] **...")
(Created page with "Category:reaction == Reaction RXN0-5180 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1] == Reaction formula == * 1 DELTA3-I...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651] ==
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== Reaction RXN0-5180 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
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* ec-number:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-33208]
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** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
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* common-name:
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== Reaction formula ==
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** l-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
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* 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD0-1028]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) found ==
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== Gene(s) associated with this reaction  ==
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* [[ARYLFORMAMIDASE-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[KYNURENINE-3-MONOOXYGENASE-RXN]]
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* Gene: [[SJ10418]]
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* [[RXN-8665]]
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** Category: [[orthology]]
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== Reaction(s) not found ==
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.6-RXN 1.13.11.6-RXN]
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* Gene: [[SJ03479]]
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{{#set: taxonomic-range=tax-2|tax-33208|tax-4751}}
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** Category: [[orthology]]
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{{#set: common-name=l-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction found=3}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: completion rate=0.6}}
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* Gene: [[SJ18388]]
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{{#set: nb total reaction=5}}
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ04442]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10781]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ19255]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-5815]], rubber biosynthesis:
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR109677
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31282 31282]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R05555 R05555]
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{{#set: direction=left-to-right}}
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{{#set: ec-number=ec-2.5.1}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN0-5180

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5815, rubber biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR109677
  • RHEA:
  • LIGAND-RXN:





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