Difference between revisions of "RXN0-5183"

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(Created page with "Category:reaction == Reaction RXN-11347 == * direction: ** left-to-right * common-name: ** phospho-n-acetylmuramoyl-pentapeptide-transferase * ec-number: ** [http://enzyme...")
(Created page with "Category:reaction == Reaction RXN-4311 == * direction: ** reversible == Reaction formula == * 1 CPD-4203[c] '''+''' 1 WATER[c] '''<=>''' 1 CPD-4205[c] '''+'''...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11347 ==
+
== Reaction RXN-4311 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** phospho-n-acetylmuramoyl-pentapeptide-transferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.7.8.13 ec-2.7.8.13]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-12258]][c] '''+''' 1 [[CPD-9646]][c] '''=>''' 1 [[CPD-12303]][c] '''+''' 1 [[UMP]][c]
+
* 1 [[CPD-4203]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CPD-4205]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ02910]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6470]], peptidoglycan biosynthesis V (&beta;-lactam resistance):
 
** '''2''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
{{#set: common-name=phospho-n-acetylmuramoyl-pentapeptide-transferase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R08062 R08062]
{{#set: ec-number=ec-2.7.8.13}}
+
{{#set: direction=reversible}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 15:32, 5 January 2021

Reaction RXN-4311

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links