Difference between revisions of "RXN0-5187"
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(Created page with "Category:reaction == Reaction RXN-14219 == * direction: ** left-to-right == Reaction formula == * 1 DUTP[c] '''+''' 1 WATER[c] '''=>''' 1 DUDP[c] '''+''' 1 P...") |
(Created page with "Category:reaction == Reaction RXN-8999 == * direction: ** left-to-right * common-name: ** di-trans,poly-cis-decaprenyl diphosphate:isopentenyl-diphosphate undecaprenylcist...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN- | + | == Reaction RXN-8999 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** di-trans,poly-cis-decaprenyl diphosphate:isopentenyl-diphosphate undecaprenylcistransferase | ||
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.5.1.31 ec-2.5.1.31] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * | + | * 8 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 8 [[PPI]][c] '''+''' 1 [[UNDECAPRENYL-DIPHOSPHATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ20712]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ18388]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-5785]], di-trans,poly-cis-undecaprenyl phosphate biosynthesis: | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27552 27552] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R06447 R06447] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/O82827 O82827] | ||
| + | ** [http://www.uniprot.org/uniprot/O43091 O43091] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JX35 Q9JX35] | ||
| + | ** [http://www.uniprot.org/uniprot/O67291 O67291] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9X1B8 Q9X1B8] | ||
| + | ** [http://www.uniprot.org/uniprot/O34559 O34559] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: common-name=di-trans,poly-cis-decaprenyl diphosphate:isopentenyl-diphosphate undecaprenylcistransferase}} |
| − | {{#set: nb pathway associated= | + | {{#set: ec-number=ec-2.5.1.31}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: nb gene associated=2}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: nb pathway associated=1}} |
| + | {{#set: reconstruction category=annotation|orthology}} | ||
| + | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:22, 15 January 2021
Contents
Reaction RXN-8999
- direction:
- left-to-right
- common-name:
- di-trans,poly-cis-decaprenyl diphosphate:isopentenyl-diphosphate undecaprenylcistransferase
- ec-number:
Reaction formula
- 8 DELTA3-ISOPENTENYL-PP[c] + 1 FARNESYL-PP[c] => 8 PPI[c] + 1 UNDECAPRENYL-DIPHOSPHATE[c]
Gene(s) associated with this reaction
- Gene: SJ20712
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ18388
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-5785, di-trans,poly-cis-undecaprenyl phosphate biosynthesis:
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
