Difference between revisions of "RXN0-5260"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8730 RXN-8730] == * direction: ** left-to-right * common-name: ** inositol-polyphosphate 5-phos...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATE-SYNTHASE-RXN CHORISMATE-SYNTHASE-RXN] == * direction: ** left-to-right * common-name: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8730 RXN-8730] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATE-SYNTHASE-RXN CHORISMATE-SYNTHASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** inositol-polyphosphate 5-phosphatase
+
** chorismate synthase
−
** inositol-1,3,4,5-tetrakisphosphate 5-phosphatase
 
−
** inositol-1,4,5-trisphosphate 5-phosphatase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.56 ec-3.1.3.56]
+
** [http://enzyme.expasy.org/EC/4.2.3.5 ec-4.2.3.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-506]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSITOL-1-3-4-TRIPHOSPHATE]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c] '''=>''' 1 [[CHORISMATE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03588]]
+
* Gene: [[SJ00821]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12333]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ20267]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ11565]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6362 PWY-6362]
+
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6364]], D-myo-inositol (1,3,4)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6364 PWY-6364]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11393 11393]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21021 21021]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03430 R03430]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01714 R01714]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P27793 P27793]
 +
** [http://www.uniprot.org/uniprot/P23353 P23353]
 +
** [http://www.uniprot.org/uniprot/Q9JT81 Q9JT81]
 +
** [http://www.uniprot.org/uniprot/Q58575 Q58575]
 +
** [http://www.uniprot.org/uniprot/P43875 P43875]
 +
** [http://www.uniprot.org/uniprot/Q9PM41 Q9PM41]
 +
** [http://www.uniprot.org/uniprot/Q9CET2 Q9CET2]
 +
** [http://www.uniprot.org/uniprot/P28777 P28777]
 +
** [http://www.uniprot.org/uniprot/Q42885 Q42885]
 +
** [http://www.uniprot.org/uniprot/Q42884 Q42884]
 +
** [http://www.uniprot.org/uniprot/P16280 P16280]
 +
** [http://www.uniprot.org/uniprot/P12008 P12008]
 +
** [http://www.uniprot.org/uniprot/O74413 O74413]
 +
** [http://www.uniprot.org/uniprot/Q12640 Q12640]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=inositol-1,3,4,5-tetrakisphosphate 5-phosphatase|inositol-1,4,5-trisphosphate 5-phosphatase|inositol-polyphosphate 5-phosphatase}}
+
{{#set: common-name=chorismate synthase}}
−
{{#set: ec-number=ec-3.1.3.56}}
+
{{#set: ec-number=ec-4.2.3.5}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:26, 26 August 2019

Reaction CHORISMATE-SYNTHASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • chorismate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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