Difference between revisions of "RXN0-5293"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FERREDOXIN--NITRITE-REDUCTASE-RXN FERREDOXIN--NITRITE-REDUCTASE-RXN] == * direction: ** left-to-rig...")
(Created page with "Category:reaction == Reaction RXN0-5293 == * direction: ** left-to-right * common-name: ** succinate-semialdehyde dehydrogenase [nad(p)+] * ec-number: ** [http://enzyme.ex...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FERREDOXIN--NITRITE-REDUCTASE-RXN FERREDOXIN--NITRITE-REDUCTASE-RXN] ==
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== Reaction RXN0-5293 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** ferredoxin--nitrite reductase
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** succinate-semialdehyde dehydrogenase [nad(p)+]
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/1.7.7.1 ec-1.7.7.1]
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** [http://enzyme.expasy.org/EC/1.2.1.16 ec-1.2.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[NITRITE]][c] '''+''' 8 [[PROTON]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 2 [[WATER]][c]
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* 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00909]]
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* Gene: [[SJ05897]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
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* [[PWY-6536]], 4-aminobutanoate degradation III:
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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* METANETX-RXN : MNXR123246
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18043 18043]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00790 R00790]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=ferredoxin--nitrite reductase}}
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{{#set: common-name=succinate-semialdehyde dehydrogenase [nad(p)+]}}
−
{{#set: ec-number=ec-1.7.7.1}}
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{{#set: ec-number=ec-1.2.1.16}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
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{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN0-5293

  • direction:
    • left-to-right
  • common-name:
    • succinate-semialdehyde dehydrogenase [nad(p)+]
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6536, 4-aminobutanoate degradation III:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123246

Property "Common-name" (as page type) with input value "succinate-semialdehyde dehydrogenase [nad(p)+" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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