Difference between revisions of "RXN0-5395"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 3.4.11.18-RXN == * direction: ** left-to-right * common-name: ** methionine aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.1...")
(Created page with "Category:reaction == Reaction RXN0-361 == * direction: ** left-to-right * common-name: ** uridine nucleosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.2.3 ec-3.2....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.4.11.18-RXN ==
+
== Reaction RXN0-361 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** methionine aminopeptidase
+
** uridine nucleosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
+
** [http://enzyme.expasy.org/EC/3.2.2.3 ec-3.2.2.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Protein-With-N-Terminal-Met]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Peptides-holder]][c]
+
* 1 [[CYTIDINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYTOSINE]][c] '''+''' 1 [[D-Ribofuranose]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ07903]]
−
* Gene: [[SJ16939]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16932]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16573]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02903]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18138]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01604]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7195]], pyrimidine ribonucleosides salvage III:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* RHEA:
−
* UNIPROT:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27959 27959]
−
** [http://www.uniprot.org/uniprot/P38062 P38062]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P47418 P47418]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02137 R02137]
−
** [http://www.uniprot.org/uniprot/Q9PM25 Q9PM25]
 
−
** [http://www.uniprot.org/uniprot/P28617 P28617]
 
−
** [http://www.uniprot.org/uniprot/P44421 P44421]
 
−
** [http://www.uniprot.org/uniprot/Q9UYT4 Q9UYT4]
 
−
** [http://www.uniprot.org/uniprot/P0AE18 P0AE18]
 
−
** [http://www.uniprot.org/uniprot/P50579 P50579]
 
−
** [http://www.uniprot.org/uniprot/Q9JWK1 Q9JWK1]
 
−
** [http://www.uniprot.org/uniprot/Q58725 Q58725]
 
−
** [http://www.uniprot.org/uniprot/P56218 P56218]
 
−
** [http://www.uniprot.org/uniprot/P19994 P19994]
 
−
** [http://www.uniprot.org/uniprot/P22624 P22624]
 
−
** [http://www.uniprot.org/uniprot/P0A1X6 P0A1X6]
 
−
** [http://www.uniprot.org/uniprot/P41392 P41392]
 
−
** [http://www.uniprot.org/uniprot/Q59509 Q59509]
 
−
** [http://www.uniprot.org/uniprot/Q01662 Q01662]
 
−
** [http://www.uniprot.org/uniprot/P95963 P95963]
 
−
** [http://www.uniprot.org/uniprot/P53579 P53579]
 
−
** [http://www.uniprot.org/uniprot/P53581 P53581]
 
−
** [http://www.uniprot.org/uniprot/P53580 P53580]
 
−
** [http://www.uniprot.org/uniprot/Q9FV49 Q9FV49]
 
−
** [http://www.uniprot.org/uniprot/Q9Z9J4 Q9Z9J4]
 
−
** [http://www.uniprot.org/uniprot/Q9RKR2 Q9RKR2]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=methionine aminopeptidase}}
+
{{#set: common-name=uridine nucleosidase}}
−
{{#set: ec-number=ec-3.4.11.18}}
+
{{#set: ec-number=ec-3.2.2.3}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:16, 14 January 2021

Reaction RXN0-361

  • direction:
    • left-to-right
  • common-name:
    • uridine nucleosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7195, pyrimidine ribonucleosides salvage III:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN0-5395&oldid=89498"