Difference between revisions of "RXN0-6427"

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(Created page with "Category:reaction == Reaction RXN-13158 == * direction: ** left-to-right * common-name: ** isopropylmalate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1...")
(Created page with "Category:reaction == Reaction RXN-6201 == * direction: ** left-to-right * common-name: ** 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1h imidazole-5-carboxylate decarboxylase * e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13158 ==
+
== Reaction RXN-6201 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** isopropylmalate dehydrogenase
+
** 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1h imidazole-5-carboxylate decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.85 ec-1.1.1.85]
+
** [http://enzyme.expasy.org/EC/4.1.1.97 ec-4.1.1.97]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
+
* 1 [[CPD-5821]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[S-ALLANTOIN]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21291]]
+
* Gene: [[SJ15812]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7849]], urate conversion to allantoin III:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7394]], urate conversion to allantoin II:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5691]], urate conversion to allantoin I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32272 32272]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26302 26302]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06604 R06604]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=isopropylmalate dehydrogenase}}
+
{{#set: common-name=5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1h imidazole-5-carboxylate decarboxylase}}
−
{{#set: ec-number=ec-1.1.1.85}}
+
{{#set: ec-number=ec-4.1.1.97}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:31, 5 January 2021

Reaction RXN-6201

  • direction:
    • left-to-right
  • common-name:
    • 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1h imidazole-5-carboxylate decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7849, urate conversion to allantoin III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7394, urate conversion to allantoin II:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5691, urate conversion to allantoin I:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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