Difference between revisions of "RXN0-6479"

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(Created page with "Category:reaction == Reaction R524-RXN == * direction: ** left-to-right * common-name: ** cyanase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.104 ec-4.2.1.104] == R...")
(Created page with "Category:reaction == Reaction RXN0-6479 == * direction: ** left-to-right * common-name: ** polynucleotide phosporylase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.13....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction R524-RXN ==
+
== Reaction RXN0-6479 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** cyanase
+
** polynucleotide phosporylase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.104 ec-4.2.1.104]
+
** [http://enzyme.expasy.org/EC/3.1.13.1 ec-3.1.13.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-69]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBAMATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[CPD0-2351]][c] '''+''' n [[WATER]][c] '''=>''' 1 [[CPD0-2352]][c] '''+''' n [[Nucleoside-Monophosphates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ02288]]
+
* Gene: [[SJ19616]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[CYANCAT-PWY]], cyanate degradation:
+
* [[PWY0-1479]], tRNA processing:
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
* METANETX-RXN : MNXR123295
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18490 18490]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03546 R03546]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P00816 P00816]
 
** [http://www.uniprot.org/uniprot/Q55367 Q55367]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=cyanase}}
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{{#set: common-name=polynucleotide phosporylase}}
{{#set: ec-number=ec-4.2.1.104}}
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{{#set: ec-number=ec-3.1.13.1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN0-6479

  • direction:
    • left-to-right
  • common-name:
    • polynucleotide phosporylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1479, tRNA processing:
    • 4 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123295