Difference between revisions of "RXN0-6480"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6906 PWY-6906] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-641 tax-641...")
(Created page with "Category:reaction == Reaction RXN0-6480 == * direction: ** left-to-right * common-name: ** ribonuclease * ec-number: ** [http://enzyme.expasy.org/EC/3.1.26.5 ec-3.1.26.5]...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6906 PWY-6906] ==
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== Reaction RXN0-6480 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-641 tax-641]
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** left-to-right
 
* common-name:
 
* common-name:
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** chitin derivatives degradation
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** ribonuclease
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== Reaction(s) found ==
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* ec-number:
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* [[PHOSACETYLGLUCOSAMINEMUT-RXN]]
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** [http://enzyme.expasy.org/EC/3.1.26.5 ec-3.1.26.5]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=NAG6PDEACET-RXN NAG6PDEACET-RXN]
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* 1 [[CPD0-2354]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[tRNA-fragment]][c] '''+''' 1 [[tRNAs]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-445 TRANS-RXN0-445]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSAMINE-6-P-DEAMIN-RXN GLUCOSAMINE-6-P-DEAMIN-RXN]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12629 RXN-12629]
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* Gene: [[SJ17384]]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSAMINE-KINASE-RXN GLUCOSAMINE-KINASE-RXN]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12627 RXN-12627]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLGLUCOSAMINE-KINASE-RXN N-ACETYLGLUCOSAMINE-KINASE-RXN]
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* Gene: [[SJ10376]]
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{{#set: taxonomic-range=tax-641}}
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** Category: [[annotation]]
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{{#set: common-name=chitin derivatives degradation}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction found=1}}
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* Gene: [[SJ19585]]
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{{#set: completion rate=0.12}}
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** Category: [[annotation]]
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{{#set: nb total reaction=8}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ17442]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ04162]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ16938]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ17040]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ06336]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ11313]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ07712]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ09263]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ06697]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY0-1479]], tRNA processing:
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** '''4''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR123296
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{{#set: direction=left-to-right}}
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{{#set: common-name=ribonuclease}}
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{{#set: ec-number=ec-3.1.26.5}}
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{{#set: nb gene associated=12}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN0-6480

  • direction:
    • left-to-right
  • common-name:
    • ribonuclease
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1479, tRNA processing:
    • 4 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123296





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