Difference between revisions of "RXN0-6491"
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(Created page with "Category:reaction == Reaction RXN-9626 == * direction: ** left-to-right * common-name: ** palmitoyl-coa hydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3...") |
(Created page with "Category:reaction == Reaction PROPIONYL-COA-CARBOXY-RXN == * direction: ** reversible * common-name: ** propionyl-coa carboxylase * ec-number: ** [http://enzyme.expasy.org...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction PROPIONYL-COA-CARBOXY-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** propionyl-coa carboxylase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ12870]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ08104]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: | ||
+ | ** '''8''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-5743]], 3-hydroxypropanoate cycle: | ||
+ | ** '''5''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PROPIONMET-PWY]], propanoyl CoA degradation I: | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6728]], methylaspartate cycle: | ||
+ | ** '''11''' reactions found over '''19''' reactions in the full pathway | ||
+ | * [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): | ||
+ | ** '''6''' reactions found over '''10''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23723 23723] |
− | {{#set: ec-number=ec- | + | * LIGAND-RXN: |
− | {{#set: nb gene associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859] |
− | {{#set: nb pathway associated= | + | * UNIPROT: |
− | {{#set: reconstruction category=annotation}} | + | ** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0] |
− | {{#set: reconstruction tool=pathwaytools}} | + | ** [http://www.uniprot.org/uniprot/P07633 P07633] |
+ | ** [http://www.uniprot.org/uniprot/P05165 P05165] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06101 Q06101] | ||
+ | ** [http://www.uniprot.org/uniprot/Q20676 Q20676] | ||
+ | ** [http://www.uniprot.org/uniprot/O24789 O24789] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=propionyl-coa carboxylase}} | ||
+ | {{#set: ec-number=ec-6.4.1.3}} | ||
+ | {{#set: nb gene associated=2}} | ||
+ | {{#set: nb pathway associated=5}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:07, 5 January 2021
Contents
Reaction PROPIONYL-COA-CARBOXY-RXN
- direction:
- reversible
- common-name:
- propionyl-coa carboxylase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 HCO3[c] + 1 PROPIONYL-COA[c] <=> 1 ADP[c] + 1 D-METHYL-MALONYL-COA[c] + 1 PROTON[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ12870
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ08104
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
- 8 reactions found over 18 reactions in the full pathway
- PWY-5743, 3-hydroxypropanoate cycle:
- 5 reactions found over 13 reactions in the full pathway
- PROPIONMET-PWY, propanoyl CoA degradation I:
- 1 reactions found over 3 reactions in the full pathway
- PWY-6728, methylaspartate cycle:
- 11 reactions found over 19 reactions in the full pathway
- PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial):
- 6 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links