Difference between revisions of "RXN0-6979"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6111 PWY-6111] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-27...")
(Created page with "Category:reaction == Reaction RXN0-2141 == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.expasy....")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6111 PWY-6111] ==
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== Reaction RXN0-2141 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
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** left-to-right
 
* common-name:
 
* common-name:
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** mitochondrial l-carnitine shuttle
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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== Reaction(s) found ==
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* ec-number:
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* [[CARNITINE-O-PALMITOYLTRANSFERASE-RXN]]
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** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
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* [[RXN-9918]]
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** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-177 TRANS-RXN-177]
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* 1 [[Cis-delta-3-decenoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c]
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{{#set: taxonomic-range=tax-2759}}
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== Gene(s) associated with this reaction  ==
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{{#set: common-name=mitochondrial l-carnitine shuttle}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: nb reaction found=2}}
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* Gene: [[SJ18059]]
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{{#set: completion rate=0.67}}
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** Category: [[annotation]]
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{{#set: nb total reaction=3}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ04443]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10624]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ06617]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ15983]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ00005]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ15984]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY0-862]], (5Z)-dodecenoate biosynthesis I:
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7858]], (5Z)-dodecenoate biosynthesis II:
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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{{#set: direction=left-to-right}}
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{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: ec-number=ec-2.3.1.179|ec-2.3.1.41}}
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{{#set: nb gene associated=7}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:44, 18 December 2020

Reaction RXN0-2141

  • direction:
    • left-to-right
  • common-name:
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-862, (5Z)-dodecenoate biosynthesis I:
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7858, (5Z)-dodecenoate biosynthesis II:
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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