Difference between revisions of "RXN0-6980"

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(Created page with "Category:reaction == Reaction RXN-17873 == * direction: ** left-to-right * common-name: ** methionine aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.18...")
(Created page with "Category:reaction == Reaction 5.1.1.18-RXN == * direction: ** left-to-right * common-name: ** serine racemase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.1.18 ec-5.1....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17873 ==
+
== Reaction 5.1.1.18-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** methionine aminopeptidase
+
** serine racemase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
+
** [http://enzyme.expasy.org/EC/5.1.1.18 ec-5.1.1.18]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[L-methionyl-L-alanyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-L-alanine]][c]
+
* 1 [[SER]][c] '''=>''' 1 [[D-SERINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ01604]]
+
* Gene: [[SJ15468]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ16573]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ18138]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ16939]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ16932]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02903]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7800]], Ac/N-end rule pathway:
+
* [[PWY-6196]], D-serine metabolism:
** '''6''' reactions found over '''21''' reactions in the full pathway
+
** '''2''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6455]], vancomycin resistance II:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10981 10981]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00589 R00589]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=methionine aminopeptidase}}
+
{{#set: common-name=serine racemase}}
{{#set: ec-number=ec-3.4.11.18}}
+
{{#set: ec-number=ec-5.1.1.18}}
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:18, 14 January 2021

Reaction 5.1.1.18-RXN

  • direction:
    • left-to-right
  • common-name:
    • serine racemase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6196, D-serine metabolism:
    • 2 reactions found over 1 reactions in the full pathway
  • PWY-6455, vancomycin resistance II:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links