Difference between revisions of "RXN0-6981"
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(Created page with "Category:reaction == Reaction ACOA140OR == * direction: ** left-to-right * common-name: ** tetradecanoyl-coa:(acceptor) 2,3-oxidoreductase == Reaction formula == * 1.0 F...") |
(Created page with "Category:reaction == Reaction ASPAMINOTRANS-RXN == * direction: ** reversible * common-name: ** aspartate transaminase ** l-phenylalanine:2-oxoglutarate aminotransferase *...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction ASPAMINOTRANS-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** aspartate transaminase |
+ | ** l-phenylalanine:2-oxoglutarate aminotransferase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[OXALACETIC_ACID]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ04188]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ08678]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ05778]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ07646]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ20943]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[ASPARTATESYN-PWY]], L-aspartate biosynthesis: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[GLUTDEG-PWY]], L-glutamate degradation II: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5913]], partial TCA cycle (obligate autotrophs): | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): | ||
+ | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: | ||
+ | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: | ||
+ | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[ASPARTATE-DEG1-PWY]], L-aspartate degradation I: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[MALATE-ASPARTATE-SHUTTLE-PWY]], malate/L-aspartate shuttle pathway: | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: common-name= | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21827 21827] |
− | {{#set: nb pathway associated= | + | * LIGAND-RXN: |
− | {{#set: reconstruction category=orthology}} | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00355 R00355] |
− | {{#set: reconstruction tool=pantograph}} | + | * UNIPROT: |
+ | ** [http://www.uniprot.org/uniprot/Q7LZ21 Q7LZ21] | ||
+ | ** [http://www.uniprot.org/uniprot/P08906 P08906] | ||
+ | ** [http://www.uniprot.org/uniprot/P12343 P12343] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06191 Q06191] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02635 Q02635] | ||
+ | ** [http://www.uniprot.org/uniprot/Q60317 Q60317] | ||
+ | ** [http://www.uniprot.org/uniprot/O28151 O28151] | ||
+ | ** [http://www.uniprot.org/uniprot/O67781 O67781] | ||
+ | ** [http://www.uniprot.org/uniprot/P08907 P08907] | ||
+ | ** [http://www.uniprot.org/uniprot/P12345 P12345] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X0Y2 Q9X0Y2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PPF7 Q9PPF7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JVS3 Q9JVS3] | ||
+ | ** [http://www.uniprot.org/uniprot/P53001 P53001] | ||
+ | ** [http://www.uniprot.org/uniprot/P96847 P96847] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9K0P5 Q9K0P5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X224 Q9X224] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Y9P0 Q9Y9P0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RWP3 Q9RWP3] | ||
+ | ** [http://www.uniprot.org/uniprot/O66737 O66737] | ||
+ | ** [http://www.uniprot.org/uniprot/O28650 O28650] | ||
+ | ** [http://www.uniprot.org/uniprot/O30304 O30304] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEK7 Q9CEK7] | ||
+ | ** [http://www.uniprot.org/uniprot/O27916 O27916] | ||
+ | ** [http://www.uniprot.org/uniprot/O05237 O05237] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9YE99 Q9YE99] | ||
+ | ** [http://www.uniprot.org/uniprot/O25383 O25383] | ||
+ | ** [http://www.uniprot.org/uniprot/O27638 O27638] | ||
+ | ** [http://www.uniprot.org/uniprot/O96142 O96142] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZLG5 Q9ZLG5] | ||
+ | ** [http://www.uniprot.org/uniprot/P00507 P00507] | ||
+ | ** [http://www.uniprot.org/uniprot/P44425 P44425] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59569 Q59569] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59197 Q59197] | ||
+ | ** [http://www.uniprot.org/uniprot/P37833 P37833] | ||
+ | ** [http://www.uniprot.org/uniprot/O48599 O48599] | ||
+ | ** [http://www.uniprot.org/uniprot/O33822 O33822] | ||
+ | ** [http://www.uniprot.org/uniprot/P05201 P05201] | ||
+ | ** [http://www.uniprot.org/uniprot/P05202 P05202] | ||
+ | ** [http://www.uniprot.org/uniprot/P14909 P14909] | ||
+ | ** [http://www.uniprot.org/uniprot/P17174 P17174] | ||
+ | ** [http://www.uniprot.org/uniprot/P33097 P33097] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43057 Q43057] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43305 Q43305] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42794 Q42794] | ||
+ | ** [http://www.uniprot.org/uniprot/P12344 P12344] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01802 Q01802] | ||
+ | ** [http://www.uniprot.org/uniprot/Q40325 Q40325] | ||
+ | ** [http://www.uniprot.org/uniprot/P36692 P36692] | ||
+ | ** [http://www.uniprot.org/uniprot/P28011 P28011] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42391 Q42391] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9L0L5 Q9L0L5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q53951 Q53951] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42803 Q42803] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42425 Q42425] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55128 Q55128] | ||
+ | ** [http://www.uniprot.org/uniprot/P72859 P72859] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55453 Q55453] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55679 Q55679] | ||
+ | ** [http://www.uniprot.org/uniprot/O48598 O48598] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42991 Q42991] | ||
+ | ** [http://www.uniprot.org/uniprot/P46248 P46248] | ||
+ | ** [http://www.uniprot.org/uniprot/O48548 O48548] | ||
+ | ** [http://www.uniprot.org/uniprot/Q60013 Q60013] | ||
+ | ** [http://www.uniprot.org/uniprot/P28734 P28734] | ||
+ | ** [http://www.uniprot.org/uniprot/Q17994 Q17994] | ||
+ | ** [http://www.uniprot.org/uniprot/Q17983 Q17983] | ||
+ | ** [http://www.uniprot.org/uniprot/Q22066 Q22066] | ||
+ | ** [http://www.uniprot.org/uniprot/Q22067 Q22067] | ||
+ | ** [http://www.uniprot.org/uniprot/O01804 O01804] | ||
+ | ** [http://www.uniprot.org/uniprot/O54170 O54170] | ||
+ | ** [http://www.uniprot.org/uniprot/O42652 O42652] | ||
+ | ** [http://www.uniprot.org/uniprot/O94320 O94320] | ||
+ | ** [http://www.uniprot.org/uniprot/P46644 P46644] | ||
+ | ** [http://www.uniprot.org/uniprot/P00504 P00504] | ||
+ | ** [http://www.uniprot.org/uniprot/P00508 P00508] | ||
+ | ** [http://www.uniprot.org/uniprot/P00509 P00509] | ||
+ | ** [http://www.uniprot.org/uniprot/P00505 P00505] | ||
+ | ** [http://www.uniprot.org/uniprot/P00503 P00503] | ||
+ | ** [http://www.uniprot.org/uniprot/P00506 P00506] | ||
+ | ** [http://www.uniprot.org/uniprot/P26563 P26563] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=aspartate transaminase|l-phenylalanine:2-oxoglutarate aminotransferase}} | ||
+ | {{#set: ec-number=ec-2.6.1.1}} | ||
+ | {{#set: nb gene associated=5}} | ||
+ | {{#set: nb pathway associated=9}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:32, 5 January 2021
Contents
Reaction ASPAMINOTRANS-RXN
- direction:
- reversible
- common-name:
- aspartate transaminase
- l-phenylalanine:2-oxoglutarate aminotransferase
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 L-ASPARTATE[c] <=> 1 GLT[c] + 1 OXALACETIC_ACID[c]
Gene(s) associated with this reaction
- Gene: SJ04188
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ08678
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ05778
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ07646
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ20943
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- ASPARAGINE-DEG1-PWY-1, L-asparagine degradation III (mammalian):
- 3 reactions found over 3 reactions in the full pathway
- ASPARTATESYN-PWY, L-aspartate biosynthesis:
- 1 reactions found over 1 reactions in the full pathway
- GLUTDEG-PWY, L-glutamate degradation II:
- 1 reactions found over 2 reactions in the full pathway
- PWY-5913, partial TCA cycle (obligate autotrophs):
- 10 reactions found over 11 reactions in the full pathway
- PWY-7383, anaerobic energy metabolism (invertebrates, cytosol):
- 4 reactions found over 7 reactions in the full pathway
- PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
- 10 reactions found over 12 reactions in the full pathway
- PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
- 9 reactions found over 10 reactions in the full pathway
- ASPARTATE-DEG1-PWY, L-aspartate degradation I:
- 1 reactions found over 1 reactions in the full pathway
- MALATE-ASPARTATE-SHUTTLE-PWY, malate/L-aspartate shuttle pathway:
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
- Q7LZ21
- P08906
- P12343
- Q06191
- Q02635
- Q60317
- O28151
- O67781
- P08907
- P12345
- Q9X0Y2
- Q9PPF7
- Q9JVS3
- P53001
- P96847
- Q9K0P5
- Q9X224
- Q9Y9P0
- Q9RWP3
- O66737
- O28650
- O30304
- Q9CEK7
- O27916
- O05237
- Q9YE99
- O25383
- O27638
- O96142
- Q9ZLG5
- P00507
- P44425
- Q59569
- Q59197
- P37833
- O48599
- O33822
- P05201
- P05202
- P14909
- P17174
- P33097
- Q43057
- Q43305
- Q42794
- P12344
- Q01802
- Q40325
- P36692
- P28011
- Q42391
- Q9L0L5
- Q53951
- Q42803
- Q42425
- Q55128
- P72859
- Q55453
- Q55679
- O48598
- Q42991
- P46248
- O48548
- Q60013
- P28734
- Q17994
- Q17983
- Q22066
- Q22067
- O01804
- O54170
- O42652
- O94320
- P46644
- P00504
- P00508
- P00509
- P00505
- P00503
- P00506
- P26563