Difference between revisions of "RXN0-7229"

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(Created page with "Category:reaction == Reaction RXN-5841 == * direction: ** left-to-right * common-name: ** 5'-nucleotidase ** β-nicotinamide d-ribonucleotide phosphohydrolase * ec-num...")
(Created page with "Category:reaction == Reaction H2Otm == * direction: ** reversible * common-name: ** h2o transport, mitochondrial == Reaction formula == * 1.0 WATER[c] '''<=>''' 1.0 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-5841 ==
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== Reaction H2Otm ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 5'-nucleotidase
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** h2o transport, mitochondrial
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** &beta;-nicotinamide d-ribonucleotide phosphohydrolase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NICOTINAMIDE_RIBOSE]][c] '''+''' 1 [[Pi]][c]
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* 1.0 [[WATER]][c] '''<=>''' 1.0 [[WATER]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ00591]]
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* Gene: [[SJ09030]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ15366]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ18895]]
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* Gene: [[SJ14495]]
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ18402]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ16098]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5381]], pyridine nucleotide cycling (plants):
 
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** '''6''' reactions found over '''11''' reactions in the full pathway
 
−
* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III (to nicotinamide riboside):
 
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** '''4''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30816 30816]
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{{#set: common-name=h2o transport, mitochondrial}}
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* LIGAND-RXN:
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{{#set: nb gene associated=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02323 R02323]
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{{#set: nb pathway associated=0}}
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{{#set: direction=left-to-right}}
+
{{#set: reconstruction category=orthology}}
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{{#set: common-name=5'-nucleotidase|&beta;-nicotinamide d-ribonucleotide phosphohydrolase}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: ec-number=ec-3.1.3.5}}
 
−
{{#set: nb gene associated=5}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 13:16, 14 January 2021

Reaction H2Otm

  • direction:
    • reversible
  • common-name:
    • h2o transport, mitochondrial

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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