Difference between revisions of "RXN0-7239"

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(Created page with "Category:reaction == Reaction RXN-2541 == * direction: ** left-to-right * common-name: ** homogentisate phytyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.5....")
(Created page with "Category:reaction == Reaction RXN-14841 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.313 ec-2.4.1.313] == Reaction formula == * 1 CPD...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-2541 ==
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== Reaction RXN-14841 ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
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** homogentisate phytyltransferase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/2.5.1.115 ec-2.5.1.115]
+
** [http://enzyme.expasy.org/EC/2.4.1.313 ec-2.4.1.313]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[HOMOGENTISATE]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[MPBQ]][c] '''+''' 1 [[PPI]][c]
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* 1 [[CPD-14795]][c] '''+''' 1 [[Protein-GlcNAc-alpha-D-mannosyl-L-Thr]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[Protein-GalNAc-GlcNAc-D-mannosyl-L-Thr]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ01234]]
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* Gene: [[SJ14363]]
 +
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00207]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-1422]], vitamin E biosynthesis (tocopherols):
 
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** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=37976 37976]
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{{#set: ec-number=ec-2.4.1.313}}
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* LIGAND-RXN:
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{{#set: nb gene associated=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07500 R07500]
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{{#set: nb pathway associated=0}}
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{{#set: direction=left-to-right}}
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{{#set: reconstruction category=annotation}}
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{{#set: common-name=homogentisate phytyltransferase}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: ec-number=ec-2.5.1.115}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:27, 15 January 2021

Reaction RXN-14841

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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