Difference between revisions of "RXN0-746"
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(Created page with "Category:reaction == Reaction TRANS-RXN-69 == * direction: ** left-to-right == Reaction formula == * 1 PROTON[e] '''+''' 1 PUTRESCINE[e] '''=>''' 1 PROTON[c] '...") |
(Created page with "Category:reaction == Reaction RXN-11667 == * direction: ** reversible * common-name: ** (s)-3-hydroxybutanoyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/E...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN-11667 == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** (s)-3-hydroxybutanoyl-coa dehydrogenase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/4.2.1.150 ec-4.2.1.150] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[S-3-HYDROXYBUTANOYL-COA]][c] '''<=>''' 1 [[CROTONYL-COA]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ03584]] |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ03913]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ07211]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-5177]], glutaryl-CoA degradation: | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6863]], pyruvate fermentation to hexanol (engineered): | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[CENTFERM-PWY]], pyruvate fermentation to butanoate: | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6583]], pyruvate fermentation to butanol I: | ||
+ | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-6883]], pyruvate fermentation to butanol II (engineered): | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: | ||
+ | ** '''8''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate): | ||
+ | ** '''7''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[P3-PWY]], gallate degradation III (anaerobic): | ||
+ | ** '''3''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): | ||
+ | ** '''6''' reactions found over '''15''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26561 26561] |
− | {{#set: nb pathway associated= | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03026 R03026] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=(s)-3-hydroxybutanoyl-coa dehydrogenase}} | ||
+ | {{#set: ec-number=ec-4.2.1.150}} | ||
+ | {{#set: nb gene associated=3}} | ||
+ | {{#set: nb pathway associated=9}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:31, 5 January 2021
Contents
Reaction RXN-11667
- direction:
- reversible
- common-name:
- (s)-3-hydroxybutanoyl-coa dehydrogenase
- ec-number:
Reaction formula
- 1 S-3-HYDROXYBUTANOYL-COA[c] <=> 1 CROTONYL-COA[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ03584
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ03913
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ07211
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-5177, glutaryl-CoA degradation:
- 5 reactions found over 5 reactions in the full pathway
- PWY-6863, pyruvate fermentation to hexanol (engineered):
- 9 reactions found over 11 reactions in the full pathway
- CENTFERM-PWY, pyruvate fermentation to butanoate:
- 5 reactions found over 7 reactions in the full pathway
- PWY-6583, pyruvate fermentation to butanol I:
- 6 reactions found over 8 reactions in the full pathway
- PWY-6883, pyruvate fermentation to butanol II (engineered):
- 5 reactions found over 6 reactions in the full pathway
- PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
- 8 reactions found over 18 reactions in the full pathway
- P162-PWY, L-glutamate degradation V (via hydroxyglutarate):
- 7 reactions found over 11 reactions in the full pathway
- P3-PWY, gallate degradation III (anaerobic):
- 3 reactions found over 11 reactions in the full pathway
- PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate):
- 6 reactions found over 15 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links